Gene
| Gene Model ID | pfu_aug1.0_1.1_00008 |
|---|---|
| Locus | scaffold1.1 : 111038 ... 114735 : - |
| To GenomeBrowser | scaffold1.1:111038..114735 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug2.0_1215.1_18188 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00008.t1 | 5 | 1 | Hexapep | 40 | 54 | 2.6e-08 | 33.0 | 0.0012 | 9.1 | 5.9 |
| pfu_aug1.0_1.1_00008.t1 | 5 | 2 | Hexapep | 70 | 95 | 2.6e-08 | 33.0 | 3.0e-05 | 0.22 | 11.0 |
| pfu_aug1.0_1.1_00008.t1 | 5 | 3 | Hexapep | 102 | 128 | 2.6e-08 | 33.0 | 3.2e-05 | 0.23 | 11.0 |
| pfu_aug1.0_1.1_00008.t1 | 5 | 4 | Hexapep | 138 | 164 | 2.6e-08 | 33.0 | 2.3e-06 | 0.017 | 14.5 |
| pfu_aug1.0_1.1_00008.t1 | 5 | 5 | Hexapep | 169 | 187 | 2.6e-08 | 33.0 | 0.0025 | 19.0 | 4.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1.1_00008.t1 | gi|342829750|gb|EGU64098.1| | clumping factor A family protein [Streptococcus parasanguinis SK236] | 8.0e-22 |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00008.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00008.t1 atgcaccaggatgtccacaccaaccaggatgtccacatcgaccaatcgaccaggatgtccgcattgatcaggatgatcac actgaccagaaagcccagatcgaaaacttttaaggttgtccacatcgataaggatgtccacatcgacaaagatgtccaca tcgacaaggatgatgtccacatcgacaaggatgttcacaacaacaaggatgtccacatcgacaaggatgtcaagaccgac aaggatgtccacatcgacaaagatgtccacatcgacaaggatgtcaacaccgacaaagatgtccacatccacatcgacaa cgatgtccacaccgacaaggatgcccacatcgacaaggatgtccacatcgacaaggatgtccacaccgacaaggatgtcc acacggacaaagatgtccacatcgacaacgatgtccacaccgacatgaatgtccacatcaataaggatgtccacatcaac aaggatgtccacaccgacaaggatgccaacatcgacaacgatgtccacaccgacaaggatgtccacatcgacaaggatgt ccacaccgacaaggatgcccacaccgacaaggatgtcactccaagtaggcctacttga |
|
Protein
| Protein ID | pfu_aug1.0_1.1_00008.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00008.t1 MHQDVHTNQDVHIDQSTRMSALIRMITLTRKPRSKTFKVVHIDKDVHIDKDVHIDKDDVHIDKDVHNNKDVHIDKDVKTD KDVHIDKDVHIDKDVNTDKDVHIHIDNDVHTDKDAHIDKDVHIDKDVHTDKDVHTDKDVHIDNDVHTDMNVHINKDVHIN KDVHTDKDANIDNDVHTDKDVHIDKDVHTDKDAHTDKDVTPSRPT |
|