Gene
| Gene Model ID | pfu_aug1.0_1.1_00012 |
|---|---|
| Locus | scaffold1.1 : 219766 ... 223350 : + |
| To GenomeBrowser | scaffold1.1:219766..223350 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00012.t1 | 1 | 1 | VWA | 1 | 159 | 2.8e-22 | 79.3 | 4.8e-26 | 3.6e-22 | 78.9 |
| pfu_aug1.0_1.1_00012.t1 | 1 | 1 | VWA_2 | 13 | 153 | 1.2e-11 | 45.0 | 2.1e-15 | 1.6e-11 | 44.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1.1_00012.t1 | gi|348542320|ref|XP_003458633.1| | 3.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00012.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00012.t1 atgacgcggtatgactttgacctgatggtgaccttcatcgagaacctgctagagggcgctgatgttgatgctgatgacgt cagagtcggcatcgctttgtataatatggaaggatccgttgtgtttgaactcaacagatacgctcaggacaaggaggcct taatgagaggaattcgaacactctcctactcttcccgatcggactctgccaacttggctgcaggtcttagtattgtaagg cttggtatgttccaggatttcaatggcgacagaccagacgtaccaaacgcccttgttgtactgacagacgccaattcaaa cagcaattttgtcgccgggttgccaaaatctgtccaagatataaaacaaagtgggattactatattcagtattggtattg gtctaagaaaccaggatgaagtcaattccttagcgacaaagccagaattcagctatgtgttgagggacatgggtcagcta tctgccgttactaagcgtatgcagaccagattaccggcattacaagccgtgttactaccacctgagattcctacgcctag acctattcttacagaaaaaataacacagacacttccacctcttccagtgaccactaaaaagccggttgtatctcttgaat gtaagtttatgttaaaaagaaaccaggaattcagcacagggtttactttgagaaggctatttaagtggaactatttctac ttctctcgccatagaaaaaaaaaaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_1.1_00012.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00012.t1 MTRYDFDLMVTFIENLLEGADVDADDVRVGIALYNMEGSVVFELNRYAQDKEALMRGIRTLSYSSRSDSANLAAGLSIVR LGMFQDFNGDRPDVPNALVVLTDANSNSNFVAGLPKSVQDIKQSGITIFSIGIGLRNQDEVNSLATKPEFSYVLRDMGQL SAVTKRMQTRLPALQAVLLPPEIPTPRPILTEKITQTLPPLPVTTKKPVVSLECKFMLKRNQEFSTGFTLRRLFKWNYFY FSRHRKKKK |
|