Gene
| Gene Model ID | pfu_aug1.0_1.1_00013 |
|---|---|
| Locus | scaffold1.1 : 224286 ... 234199 : + |
| To GenomeBrowser | scaffold1.1:224286..234199 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug2.0_304.1_13969 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00013.t1 | 2 | 1 | VWA | 27 | 197 | 6.7e-38 | 130.1 | 2.8e-23 | 1.4e-19 | 70.5 |
| pfu_aug1.0_1.1_00013.t1 | 2 | 1 | VWA_2 | 44 | 189 | 2.2e-21 | 76.7 | 2.0e-14 | 9.8e-11 | 42.0 |
| pfu_aug1.0_1.1_00013.t1 | 2 | 2 | VWA | 294 | 449 | 6.7e-38 | 130.1 | 1.1e-20 | 5.2e-17 | 62.1 |
| pfu_aug1.0_1.1_00013.t1 | 2 | 2 | VWA_2 | 329 | 446 | 2.2e-21 | 76.7 | 2.4e-11 | 1.2e-07 | 32.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1.1_00013.t1 | gi|45384318|ref|NP_990352.1| | 6.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00013.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00013.t1 atgatagggaaaaagcagtcgaatgacgttacatgtattttttcgagtgacgattatagtgatgaggccgatattctggt cattttccattctggacataagacaaaagcaaaagagttcaataaaagactgaaggttttcatttcaaatctatttgcta aagctaatattgacaagggtaaggttcgcggggctcttataaattacggcgcaggagccaatgtattattcgatttcaac aaatatagtaagaaaaaggacctccgaggatatacccgtagacttagggccaagttaaggagcagtaagtcaaacttgct ggccgctcttaaagcagcaagaacgcaggtgttcacagcagcaggaggcgcacggacaacacaagatgtgcccggagcag tcatacttataaccgacatgaaggctaatactcctctgcctggtattgtatcagaagttgacgaattgaaaaagcaaggc atctcctttttcacacttggtattggtaaagccgatacagcggaactacaatcaatctcaagtcagccagtttcagagta ttatcagaagatttcgaagtatgaccaactgattaaagatccagatgtaattgaccatattattcggggaatatatagtt tgcaaggtgcttcctacaaaggacagaggcgaacaacaagtaaaccaataatagttactaaaccccctataactactact actaaaccaattataataacaaaacctacaacggtagcgacaactacggcttacaaacaacccgttacatcaccagatca caaggaaatcttcaatgttttaaatatgggatacctgcctcaacatgacgatccagttcaaagagatcctaaagtagcgg atatcgtcatcgtattccatgcgtatcccacagtaacgagaagagacttcaagaagtacttgctgaaatatatggttaga cttgtaaagaaggcggacattgacggcgggaaagtgagggtggcggtcgtgacgtatggtggtaaaggtcaagtcgtcct gcagctagatcagttcagttcgaagaaaaaacttctgaagggaataaagaagattccaaagaatctgcgattcaagaaag gaaatttacaagatgcgttactaaaggctagaagggatgtattgggtgtgaaaggaaggcagaacgttaataaatatgtc attttgataacagatgctagctacatgcggcaaatgaaccatacatcatttgaagaagacaaactgaacgcggaaggtgt tactatatatgtagtagctgttggtgtgaaggatacttccggattgagatatgttgctagttatcccatcatcctagaag tcaaagagatgaaagatttgaagaactacaaaaagacgggcaagcctattgttcgaagaatttcagcattgaggaagaag aaaaagaaaaagggaaagaaaggaaagaaaaatagaaagggaaagaagaaaggaagaaagaataagaaagggaagaacaa aggaaggaacaaaaagaaaaacaggggtaaaaagaagaaagagaatgtgaataaatcaaaaacaaatagtacaattccaa atacgacatcgaaaaacactttagtatcgacaagtatagttcgaaatacttcaaaggatcaatctaatgagcttacaacc ttaaacgtacaaacaaatcccatatttgatccagggaatgtaaaaccagccaaatcaagcataaatgtagctgattcgtt tcaaggtaaaaatacgtctgaaattgttgtcgggacaactgatataatagtgcacggtgatatggccgaaacgaagtcaa caaaaggaatagataatacagacagacgaggaactgaagaaacaagacaactgactaggacacccaatgaatatcagtct gaagataaagatgatctcattactgtatcaaatcagcctgatggggaaggggagcaaacgacaagtatcccttttacaga cgaagacaatggggacagtattgatggtaattcagcaatacaatcctctacgatttcaccaataacaaactatttcactc tagaagacgttacaattaagtatgatgagggaaatgtaagaccttcacttcaaatggactatgaattcacgataaaggca ggcgaaagcaagactgaagatgaaaatatggctacgacacaaagtttccagcatgctacagacaatgcacccacaaaagg atatggacagactgatggttcggatctgtatgaggcaggcagtgtagccgatccgttactaggcacagaaatcaaagaga aaagcaaaaatttgaataaagctgaaacagattatgtcgaattgcgactttatgtcaacatgcgacttatttatgtcaac atgccagataattatgttgacatgcaagacgattatgttgacatacaatgtcgaatgttgacataa |
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Protein
| Protein ID | pfu_aug1.0_1.1_00013.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00013.t1 MIGKKQSNDVTCIFSSDDYSDEADILVIFHSGHKTKAKEFNKRLKVFISNLFAKANIDKGKVRGALINYGAGANVLFDFN KYSKKKDLRGYTRRLRAKLRSSKSNLLAALKAARTQVFTAAGGARTTQDVPGAVILITDMKANTPLPGIVSEVDELKKQG ISFFTLGIGKADTAELQSISSQPVSEYYQKISKYDQLIKDPDVIDHIIRGIYSLQGASYKGQRRTTSKPIIVTKPPITTT TKPIIITKPTTVATTTAYKQPVTSPDHKEIFNVLNMGYLPQHDDPVQRDPKVADIVIVFHAYPTVTRRDFKKYLLKYMVR LVKKADIDGGKVRVAVVTYGGKGQVVLQLDQFSSKKKLLKGIKKIPKNLRFKKGNLQDALLKARRDVLGVKGRQNVNKYV ILITDASYMRQMNHTSFEEDKLNAEGVTIYVVAVGVKDTSGLRYVASYPIILEVKEMKDLKNYKKTGKPIVRRISALRKK KKKKGKKGKKNRKGKKKGRKNKKGKNKGRNKKKNRGKKKKENVNKSKTNSTIPNTTSKNTLVSTSIVRNTSKDQSNELTT LNVQTNPIFDPGNVKPAKSSINVADSFQGKNTSEIVVGTTDIIVHGDMAETKSTKGIDNTDRRGTEETRQLTRTPNEYQS EDKDDLITVSNQPDGEGEQTTSIPFTDEDNGDSIDGNSAIQSSTISPITNYFTLEDVTIKYDEGNVRPSLQMDYEFTIKA GESKTEDENMATTQSFQHATDNAPTKGYGQTDGSDLYEAGSVADPLLGTEIKEKSKNLNKAETDYVELRLYVNMRLIYVN MPDNYVDMQDDYVDIQCRMLT |
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