Gene
| Gene Model ID | pfu_aug1.0_1.1_00014 |
|---|---|
| Locus | scaffold1.1 : 234416 ... 250788 : + |
| To GenomeBrowser | scaffold1.1:234416..250788 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00014.t1 | 5 | 1 | VWA_2 | 1 | 63 | 0.0 | 231.9 | 0.00079 | 1.1 | 9.3 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 1 | VWA | 2 | 63 | 0.0 | 566.9 | 0.00012 | 0.16 | 11.6 |
| pfu_aug1.0_1.1_00014.t1 | 4 | 1 | VWA_CoxE | 104 | 196 | 2.3e-06 | 26.9 | 0.0044 | 6.0 | 5.9 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 2 | VWA | 106 | 281 | 0.0 | 566.9 | 0.0 | 1.59748e-43 | 148.5 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 2 | VWA_2 | 106 | 260 | 0.0 | 231.9 | 1.2e-19 | 1.7e-16 | 60.8 |
| pfu_aug1.0_1.1_00014.t1 | 4 | 1 | VWA_3 | 106 | 247 | 1.9e-32 | 112.1 | 3.2e-09 | 4.3e-06 | 26.4 |
| pfu_aug1.0_1.1_00014.t1 | 4 | 2 | VWA_CoxE | 317 | 409 | 2.3e-06 | 26.9 | 0.0068 | 9.2 | 5.3 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 3 | VWA | 320 | 495 | 0.0 | 566.9 | 9.80909e-45 | 1.29998e-41 | 142.2 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 3 | VWA_2 | 320 | 489 | 0.0 | 231.9 | 8.1e-18 | 1.1e-14 | 54.9 |
| pfu_aug1.0_1.1_00014.t1 | 4 | 2 | VWA_3 | 320 | 461 | 1.9e-32 | 112.1 | 1.5e-08 | 2.0e-05 | 24.3 |
| pfu_aug1.0_1.1_00014.t1 | 4 | 3 | VWA_CoxE | 596 | 688 | 2.3e-06 | 26.9 | 0.00013 | 0.17 | 11.0 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 4 | VWA | 600 | 775 | 0.0 | 566.9 | 4.90454e-44 | 6.50006e-41 | 139.9 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 4 | VWA_2 | 600 | 752 | 0.0 | 231.9 | 4.0e-19 | 5.3e-16 | 59.1 |
| pfu_aug1.0_1.1_00014.t1 | 4 | 3 | VWA_3 | 600 | 741 | 1.9e-32 | 112.1 | 1.0e-09 | 1.4e-06 | 28.1 |
| pfu_aug1.0_1.1_00014.t1 | 4 | 4 | VWA_CoxE | 809 | 901 | 2.3e-06 | 26.9 | 0.0056 | 7.6 | 5.6 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 5 | VWA | 812 | 987 | 0.0 | 566.9 | 7.00649e-45 | 9.90017e-42 | 142.6 |
| pfu_aug1.0_1.1_00014.t1 | 5 | 5 | VWA_2 | 812 | 980 | 0.0 | 231.9 | 3.6e-19 | 4.9e-16 | 59.3 |
| pfu_aug1.0_1.1_00014.t1 | 4 | 4 | VWA_3 | 812 | 953 | 1.9e-32 | 112.1 | 8.4e-10 | 1.1e-06 | 28.3 |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00014.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00014.t1 atgatcactgacgcagcctccaccatcaatgtcggggacatagaaggcaccaaggcgtctctgaagggaatgggcatcga tgtttacagtgttggcgtgggtttaagggacaagtcagagcttgaggcgatagcgacatcatcagaaaatatttacagcg tgtctggatatgataaattgaacagagctgagaatgaaattcgacgaaatgtcagatcattgcgtgtgttacctgctcct ccagtcacacctgcaccaccaagaacaacagttgtgacacttcctggaaatggccaagcctgctttgcaaaggtcgacat tgtgtttgtcctggattcttccaccagcgttggagaacaaaactttagaaagatgctcaaattctgcaaagactttctcc atgctgccaacatagactccggcgatgtcagggttgggatcgtgtcatacagtacaagtgtgaccgtggaatttcagatg aataaattcaagacaaagtcagacatatatgatgcgattgataaaattccttggagatatggtagtacaaacactgcaga tgcccttcagacgatgcacactgacatgtttacaacagtaaatggagaccgtcgcgatgtccgaaacatcgccattgttg tcacagatggtgtctccaatatcaactccagacggaccattcccgaggcagagcaagctagggctaaggggatccaggtg tatgccattggtatcggtctaacagacaaacgagaagtaaatggtattgcctctgttcccgctgcagacaatgctttctt cgtcacaaattttgacgagttggagggacttgacgaacaaatattccaaaccttctgtccagatctcttcccgaagaagg aaaagacaacgccagctcctacaacacagccaatcgtcacaaggcctccagttatcacagcttgcaatgcaaaggtggat cttatctttgtcttggattcctctactagtgtcggacaagacaacttctctaaaatgctgagattctgtaaagaattcct tcactcagcaaacattgattccggtgacgtcagagtgggtgtggtcacttacagcacggacgttactgttgaatttcaaa tgaatgactattttaccatgcaagaggttcttgatgcaatagataacattccctggcgatatggtagtacaaacacagcg gatggccttctcaaaatgcatgacgtcatgttcactcttgcaaatggcgatcgaccggatgtagacaatgtggctgtcgt catgactgatggtgtttcaaatattaactcaagaaggacaatcccagaagctgacgcagctcatatgaagaatatccacg tgtatgctataggtataggcctgacggacatgcgcgaagtgaatgaaatagcctctgagccgcattcagagaatgccttt gctgttcaaacatttgacgacttagagggtctcgacgaacagatattcaactctatttgtccaggtcaaggacatgcacg gatccagcacctgaaaacggcggtgctccatgcgaaggcattgatacggaaatacgaacatgtacaccagaaacaaaatg tgcagtcgacggaatttggtcagaatgggggccttactccgagtgttcgattacatgtacttcgaatgatggaagcggac ctaacacttacctgtatgaatatagaaaatgctttggataaacaattgttcaagactgttcaagcacactctatattatt ttattttcagtcattactcttcctccgaaaacaggttgacctcgtattcatacttgactcatcgacaagcgtaggcgagg gcaattacaagaagatgctacaattttgcaaggacttcctacatgctgcgagtattaacactggtgatgttagagttggt ttagtgtcttacagcacatcagttactgttgaattccaaatgaacgaatactccacaaagcagcaaatctatgatgcaat agatcagataccgtggcgatatggaagcactaatactgcggatgccttgcaaacaatgcacgaagacatgtttaccgtcg ggaatggagaccgacctgatgtcaagaatttggccatcattgtcaccgatggtgtttcaaatatcaattccaggcgcacc ataccggaagcggaagcagctagagctaagaatatccatatttatgctatcggtattggcctgaccgatgtaaaggaagt gaatggaattgcgtctatccctgcagaggataatgctttctttgtacagaattttgatgaattagaaggacttgacgaag atattttccaatctctttgcgaaggtatcattccaactccaaaaccagtcgaacgaacaacaatgcctgtcaccactctt gccccaccaattacagcttgcaatgccaaagtcgacttggtatttgttttggactcatcaactagtgtcggacaggataa ctttgtaaagatgcagacattttgtaaagaatttttacattctgcaaacatcgactctggtgacgtcagagtaggcgtgg taacatacagtactgacgtcacagtagaattccacatgaacgaattttccaccagacaggctgtgtttgacgccattgac gccataccctggcggtacggtagtaccaacacagcagatggccttcttaagatgcatgacgtcatgtttactgcacaaaa tggcgaccggccagatgttgacaatattgccttggtgatgactgatggtgtctccaatatcaactcaagacgtacaattc cagaggctgatgcggctcatcagaaaaatatccatgtgtatgctataggtatcggtctcacggatatgcgtgaagtaaat gagatagcatcagagccacattcagaaaatgcctttgctgtaaagacgttcgacgatctggaaggacttgatgaacagat atttaactcgatttgtcctggtaaacaaatttgttcatag |
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Protein
| Protein ID | pfu_aug1.0_1.1_00014.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00014.t1 MITDAASTINVGDIEGTKASLKGMGIDVYSVGVGLRDKSELEAIATSSENIYSVSGYDKLNRAENEIRRNVRSLRVLPAP PVTPAPPRTTVVTLPGNGQACFAKVDIVFVLDSSTSVGEQNFRKMLKFCKDFLHAANIDSGDVRVGIVSYSTSVTVEFQM NKFKTKSDIYDAIDKIPWRYGSTNTADALQTMHTDMFTTVNGDRRDVRNIAIVVTDGVSNINSRRTIPEAEQARAKGIQV YAIGIGLTDKREVNGIASVPAADNAFFVTNFDELEGLDEQIFQTFCPDLFPKKEKTTPAPTTQPIVTRPPVITACNAKVD LIFVLDSSTSVGQDNFSKMLRFCKEFLHSANIDSGDVRVGVVTYSTDVTVEFQMNDYFTMQEVLDAIDNIPWRYGSTNTA DGLLKMHDVMFTLANGDRPDVDNVAVVMTDGVSNINSRRTIPEADAAHMKNIHVYAIGIGLTDMREVNEIASEPHSENAF AVQTFDDLEGLDEQIFNSICPGQGHARIQHLKTAVLHAKALIRKYEHVHQKQNVQSTEFGQNGGLTPSVRLHVLRMMEAD LTLTCMNIENALDKQLFKTVQAHSILFYFQSLLFLRKQVDLVFILDSSTSVGEGNYKKMLQFCKDFLHAASINTGDVRVG LVSYSTSVTVEFQMNEYSTKQQIYDAIDQIPWRYGSTNTADALQTMHEDMFTVGNGDRPDVKNLAIIVTDGVSNINSRRT IPEAEAARAKNIHIYAIGIGLTDVKEVNGIASIPAEDNAFFVQNFDELEGLDEDIFQSLCEGIIPTPKPVERTTMPVTTL APPITACNAKVDLVFVLDSSTSVGQDNFVKMQTFCKEFLHSANIDSGDVRVGVVTYSTDVTVEFHMNEFSTRQAVFDAID AIPWRYGSTNTADGLLKMHDVMFTAQNGDRPDVDNIALVMTDGVSNINSRRTIPEADAAHQKNIHVYAIGIGLTDMREVN EIASEPHSENAFAVKTFDDLEGLDEQIFNSICPGKQICS |
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