Gene
| Gene Model ID | pfu_aug1.0_1.1_00016 |
|---|---|
| Locus | scaffold1.1 : 259176 ... 270196 : + |
| To GenomeBrowser | scaffold1.1:259176..270196 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00016.t1 | 4 | 1 | VWA | 8 | 163 | 0.0 | 446.7 | 3.6e-25 | 5.9e-22 | 78.2 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 1 | VWA_2 | 16 | 164 | 0.0 | 166.3 | 4.0e-08 | 6.6e-05 | 23.0 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 1 | VWA_3 | 56 | 134 | 2.3e-19 | 69.6 | 0.012 | 21.0 | 4.8 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 2 | VWA | 182 | 356 | 0.0 | 446.7 | 9.80909e-45 | 1.70006e-41 | 141.9 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 2 | VWA_2 | 182 | 350 | 0.0 | 166.3 | 1.2e-18 | 2.0e-15 | 57.2 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 2 | VWA_3 | 182 | 324 | 2.3e-19 | 69.6 | 5.6e-10 | 9.2e-07 | 28.6 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 3 | VWA | 372 | 539 | 0.0 | 446.7 | 7.3e-27 | 1.2e-23 | 83.7 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 3 | VWA_3 | 372 | 510 | 2.3e-19 | 69.6 | 0.011 | 18.0 | 5.0 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 3 | VWA_2 | 389 | 539 | 0.0 | 166.3 | 4.6e-09 | 7.6e-06 | 26.1 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 4 | VWA | 575 | 749 | 0.0 | 446.7 | 1.4013e-45 | 2.20004e-42 | 144.7 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 4 | VWA_2 | 575 | 739 | 0.0 | 166.3 | 2.8e-18 | 4.7e-15 | 56.1 |
| pfu_aug1.0_1.1_00016.t1 | 4 | 4 | VWA_3 | 575 | 717 | 2.3e-19 | 69.6 | 3.7e-09 | 6.0e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1.1_00016.t1 | gi|344298565|ref|XP_003420962.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00016.t1 atggactcatctgtacctaatgagatatttggctggatgaagggctttgtacgatcaattacgaaatctttcaacatcga caacgaagaatataaagttggccttttacgatacagtacgaaccctgatacgcagtggcaattgagtgaatacaagaaag gaagtgacgttgtaagagcagtagacaatgtcccataccttcctggtgagagaaacacggctcaagctattgactatgtg acgtcacaaatgttccgacctccaaaaggggacagagatttcgcgcgaaactatatcatccttctgacaggtattgccgg aagtcaagaccgctacgaggcatggatatctgcggaaaatgctgagaaagccggcgctagattgtttactattggcataa atctcgacgatacaacggaacttgatgagatatcaagtcaccccttatcaacgtaccaataccttataaatagtgaggag gacctgaagggtatccctgatgaaatgagaatctccctgaatggtaaatgctttgcaaagatagacatggtattcatctt ggattcatcaacaagcgtcggacaagataattacaagaaaatgcttcaattctgtaaggacttccttcatagtgcaaaca tagactcgggagaagttcgagtaggcatcgtttcatacagcactgaagttactgtagagttccaaatgaacgagtattct acaaggcaggacatatataacgctattgacaatattccatggagatatggtagtacgaacacagcagatggcctgcaaac aatgcatgaacagatgtttacagttgccaatggcgaccgaccggatgttgatgacatcgcaatcattgtcactgatggtg tatcaaatatcaattcccgaaggacaatccccgaggctgaagcagcacgtgcgaagaatattcatatatatgccatcggt attggcttaacagatgacagggaggtaaacggaatagcctcagatccaccggaaaagaacgccttcttcgtcaatgactt cgacgaactagagggacttgatgaaagcatcttctcatctatttgtccagcgaaacctcgagacagcggatatgacgtcg tagttgtcatggactcatctgtacctaatgagatatttggctggatgaagggctttgtacgatcaataacgaaatctttc aatatcgacaacgaagaatataaagttggccttttacgatacagtacgaaccccgatacgcagtggcagttgagtgaata cagtaaaggaagtgacgttgtacgagcagtagacaatgtcccataccttcctggtgagagaaacacggctcaagctattg actatgtgacgtcacaaatgttccgacctccaaaaggggacagagatttcgcgcgaaactacatcgtcctccttaccgga atttccggaagtccagaccgctacgaggcatggatagctgctgaaaatgcagagaaagctggcgctagattgtttacaat tggcataaatctagacgatacaacggaactcgatgaaatatcaagtcatcctttatcaacataccaatatctcataaata atgaagaggacttaaaaggcatcccggatgacatgagcgtctccttgagcggtatgcctaagcaaccaggaccgtggaga ccccgtcctcgacgtccaccaccagagtgtttcacaaagatagatatggtatttattctggattcatcaacaagcgttgg acaggccaatttcaagaaaatgctgcaattctgcaaagatttccttcacagtgctaatattgacacgggcgatgtccggg tgggcattgtttcatacagtactgatgttaccgtagagttccatatgaacgagtatcaaacaaaacaggatatatataac gctattgacaatattccatggagatatggcagtactaacacagcagatggcctgcaaacaatgcacgaacagatgtttac agttgccaatggcgaccgatccggtgtagatgacattgcaatcattgtcactgatggtgtatcaaatatcaattcccgaa ggacaatccccgaggctgaagcagcacgtgcgaagaatattcatatatatgccatcggtattggcttaacagatgacagg gaggtaaacggaatagcctcagatccaccggaaaagaacgccttctttgtcaatgacttcgacgaactagagggacttga tgaaagcatcttctcatctatttgtccaggtactcaacacattatttatttcggacttctagcttgctag |
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Protein
| Protein ID | pfu_aug1.0_1.1_00016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00016.t1 MDSSVPNEIFGWMKGFVRSITKSFNIDNEEYKVGLLRYSTNPDTQWQLSEYKKGSDVVRAVDNVPYLPGERNTAQAIDYV TSQMFRPPKGDRDFARNYIILLTGIAGSQDRYEAWISAENAEKAGARLFTIGINLDDTTELDEISSHPLSTYQYLINSEE DLKGIPDEMRISLNGKCFAKIDMVFILDSSTSVGQDNYKKMLQFCKDFLHSANIDSGEVRVGIVSYSTEVTVEFQMNEYS TRQDIYNAIDNIPWRYGSTNTADGLQTMHEQMFTVANGDRPDVDDIAIIVTDGVSNINSRRTIPEAEAARAKNIHIYAIG IGLTDDREVNGIASDPPEKNAFFVNDFDELEGLDESIFSSICPAKPRDSGYDVVVVMDSSVPNEIFGWMKGFVRSITKSF NIDNEEYKVGLLRYSTNPDTQWQLSEYSKGSDVVRAVDNVPYLPGERNTAQAIDYVTSQMFRPPKGDRDFARNYIVLLTG ISGSPDRYEAWIAAENAEKAGARLFTIGINLDDTTELDEISSHPLSTYQYLINNEEDLKGIPDDMSVSLSGMPKQPGPWR PRPRRPPPECFTKIDMVFILDSSTSVGQANFKKMLQFCKDFLHSANIDTGDVRVGIVSYSTDVTVEFHMNEYQTKQDIYN AIDNIPWRYGSTNTADGLQTMHEQMFTVANGDRSGVDDIAIIVTDGVSNINSRRTIPEAEAARAKNIHIYAIGIGLTDDR EVNGIASDPPEKNAFFVNDFDELEGLDESIFSSICPGTQHIIYFGLLAC |
|