Gene
| Gene Model ID | pfu_aug1.0_1.1_00017 |
|---|---|
| Locus | scaffold1.1 : 270326 ... 284820 : + |
| To GenomeBrowser | scaffold1.1:270326..284820 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00017.t1 | 4 | 1 | VWA | 8 | 163 | 0.0 | 498.3 | 4.1e-25 | 6.1e-22 | 78.1 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 1 | VWA_2 | 16 | 164 | 0.0 | 200.7 | 1.2e-08 | 1.8e-05 | 24.9 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 1 | VWA_3 | 55 | 134 | 1.0e-23 | 83.7 | 0.1 | 150.0 | 1.9 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 2 | VWA | 199 | 373 | 0.0 | 498.3 | 2.8026e-45 | 4.69996e-42 | 143.7 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 2 | VWA_2 | 199 | 367 | 0.0 | 200.7 | 1.6e-18 | 2.3e-15 | 57.1 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 2 | VWA_3 | 199 | 341 | 1.0e-23 | 83.7 | 7.5e-10 | 1.1e-06 | 28.4 |
| pfu_aug1.0_1.1_00017.t1 | 1 | 1 | TSP_1 | 386 | 441 | 2.7e-07 | 30.5 | 4.5e-10 | 6.6e-07 | 29.3 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 3 | VWA | 452 | 627 | 0.0 | 498.3 | 4.2039e-45 | 5.70048e-42 | 143.4 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 3 | VWA_2 | 452 | 621 | 0.0 | 200.7 | 6.1e-19 | 9.1e-16 | 58.4 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 3 | VWA_3 | 452 | 593 | 1.0e-23 | 83.7 | 4.5e-09 | 6.6e-06 | 25.8 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 4 | VWA | 670 | 843 | 0.0 | 498.3 | 4.90454e-43 | 7.29999e-40 | 136.5 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 4 | VWA_2 | 670 | 832 | 0.0 | 200.7 | 6.0e-19 | 8.8e-16 | 58.4 |
| pfu_aug1.0_1.1_00017.t1 | 4 | 4 | VWA_3 | 670 | 810 | 1.0e-23 | 83.7 | 6.7e-08 | 9.9e-05 | 22.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1.1_00017.t1 | gi|334348930|ref|XP_001379945.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00017.t1 atggactcctctgtacctaatgagatatttggctggatgaagggctttgtacgatcaattacgaaatctttcaatatcga caacgaagaatataaagttggccttttacgatacagtacgaaccctgatacccaatggcagttgagtgaatacagtaaag gaagtgacgttgtacgagcagtagacaatgtcccataccttcctggtgagagaaacacggctcaagctattgactatgtg acgtcacaaatgttccgacctccaaaaggggacagagattttgcacgaaactacatcgtcctcctaaccggaatttccgg aagtccagaccgctacgaggcatggatagctgctgaaaatgccgagaaagccggcgctagattgtttactattggcatta atctcgacgatacaacggaacttgatgaaatatcgagtcatcctttatcaacgtatcagtatctaataaatagtgaagag gacttaaaaggcatcccggatgaaatgagaatctccctgaatggtatgcctaagcaaccaggaccgtggagaccccgtcc tcgacgtccaccaccagagtgttttacaaagatagatatggtatttatcttggattcatccacaagtgtcggacaggaaa attacaagaaaatgctgcagttctgtaaagacttccttcacagtgcaaacatagactcaggagatgtacgtgtcggtatt gtttcctatagtactgatgttaccgtagaattccaaatgaacgaatacaccacgaagcaggacatatataacgccattga caatataccttggagatacggcagtacgaacacggctgatggactacagactatgcatgaacaaatgtttacagttgcca atggagaccgaccggatgttgatgatattgccatcattgtcacggatggtgtatcgaatatcaattcccgtaggacaatt ccagaagctgaaaatgcacgcgcgaagaatattcatatttatgccattggtattggcttaacagatgacagggaggtaaa cggaatagcctcagatccaccggaaaagaacgccttttttgtcaatgactttgatgaacttgagggacttgatgaaagta tattctcttcgatttgtcccgttgatggtaactggtcagaatgggacccttggacaccatgttcgatcacatgctcttct actaccggcggacctgttagtggcacccaatcccggtcaagaaagtgtaccaaccctgttccctctaatggcggtgctcc ttgtgaaggcgatgatactgaagttcgctcttgtactccagcaaacttctgtgcagaatgttttgcgaagattgacttga ttttcgtactggattcctctaccagcgtgggccaagaaaactacgaaaagatgcttcaattctgtaaagatttcctccat gcggcaaatgtcgatggcggtgacgtcagggtcggtatagtgtcatacagtaccgacgtcaccatcgagttcaatctgaa tgaatacagcactaaacaaactttatttgacgctattgataatataccatggaggtatggaagtacaaacacagcagatg gccttgagacgatgcatgacacaatgtttactgttgccaacggcgaccgaccggatgttgacaatatcgccgtagtaatc actgatggtgtgtcgaatattaattcaagaaggacaatccctgaagctgttgcagctaggaataagaagatccatatcta tgccattggtattggccttacagacatgagggaggtaaatggaatagcttcagaaccagcctcaagaaatgcatttgcag ttcaagacttcgatgagctggagggtttggatgaaagcatattcgattccatttgtccaggcgttaggcgcaccacacca gccccaatcaagacaactaaagagactacacaagcaccgcctacaacacttgctccaacaacaacaggacagtgcttcga caatattgatctcatcttcatattggattcgtcaacaagcgttggtgaagacaactttaagaagatgctggaattctgta aagagttcctacatacagcggatattgattccggagcagtaaaagttggagtcgtttcgtacagtacagaagttagcatc gagtttcatttagatgagtattcggacagagctagtcttttcacagcaattgatgcaatcccctggcgctacggaagcac taatactgcagatggtttgaaagcaatgcacaacgaaatgttcatacctgaaaaaggggacagaccaggcgttccaaata tagtcgtcattatgactgacggtgtctcaaatataaactcagctaaaacgattccggaagcggagagtgcgcgcgcagat ggaattaaaatatatgcagttggtatcggtctaacagatatgagggaggttaatggaatagcctccgatccaccgtcagt gcatgcgttcgcagtacagacttttgatgacctcgagggattagatgaaaccattttctcatcaagttgtccagattcaa ttattacataa |
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Protein
| Protein ID | pfu_aug1.0_1.1_00017.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00017.t1 MDSSVPNEIFGWMKGFVRSITKSFNIDNEEYKVGLLRYSTNPDTQWQLSEYSKGSDVVRAVDNVPYLPGERNTAQAIDYV TSQMFRPPKGDRDFARNYIVLLTGISGSPDRYEAWIAAENAEKAGARLFTIGINLDDTTELDEISSHPLSTYQYLINSEE DLKGIPDEMRISLNGMPKQPGPWRPRPRRPPPECFTKIDMVFILDSSTSVGQENYKKMLQFCKDFLHSANIDSGDVRVGI VSYSTDVTVEFQMNEYTTKQDIYNAIDNIPWRYGSTNTADGLQTMHEQMFTVANGDRPDVDDIAIIVTDGVSNINSRRTI PEAENARAKNIHIYAIGIGLTDDREVNGIASDPPEKNAFFVNDFDELEGLDESIFSSICPVDGNWSEWDPWTPCSITCSS TTGGPVSGTQSRSRKCTNPVPSNGGAPCEGDDTEVRSCTPANFCAECFAKIDLIFVLDSSTSVGQENYEKMLQFCKDFLH AANVDGGDVRVGIVSYSTDVTIEFNLNEYSTKQTLFDAIDNIPWRYGSTNTADGLETMHDTMFTVANGDRPDVDNIAVVI TDGVSNINSRRTIPEAVAARNKKIHIYAIGIGLTDMREVNGIASEPASRNAFAVQDFDELEGLDESIFDSICPGVRRTTP APIKTTKETTQAPPTTLAPTTTGQCFDNIDLIFILDSSTSVGEDNFKKMLEFCKEFLHTADIDSGAVKVGVVSYSTEVSI EFHLDEYSDRASLFTAIDAIPWRYGSTNTADGLKAMHNEMFIPEKGDRPGVPNIVVIMTDGVSNINSAKTIPEAESARAD GIKIYAVGIGLTDMREVNGIASDPPSVHAFAVQTFDDLEGLDETIFSSSCPDSIIT |
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