Gene
| Gene Model ID | pfu_aug1.0_1.1_00019 |
|---|---|
| Locus | scaffold1.1 : 293456 ... 313503 : + |
| To GenomeBrowser | scaffold1.1:293456..313503 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00019.t1 | 8 | 1 | VWA | 2 | 156 | 0.0 | 793.8 | 2.9e-35 | 3.9e-32 | 111.3 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 1 | VWA_2 | 16 | 135 | 0.0 | 305.0 | 1.3e-14 | 1.7e-11 | 44.5 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 1 | VWA_3 | 43 | 133 | 1.6e-40 | 138.3 | 1.0e-05 | 0.014 | 15.1 |
| pfu_aug1.0_1.1_00019.t1 | 6 | 1 | vWA-TerF-like | 55 | 132 | 2.5e-09 | 37.2 | 0.092 | 120.0 | 2.3 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 2 | VWA | 212 | 375 | 0.0 | 793.8 | 7.8e-30 | 1.0e-26 | 93.7 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 2 | VWA_3 | 212 | 351 | 1.6e-40 | 138.3 | 1.3e-08 | 1.8e-05 | 24.4 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 2 | VWA_2 | 216 | 363 | 0.0 | 305.0 | 1.1e-10 | 1.5e-07 | 31.7 |
| pfu_aug1.0_1.1_00019.t1 | 6 | 2 | vWA-TerF-like | 234 | 319 | 2.5e-09 | 37.2 | 0.57 | 770.0 | -0.3 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 3 | VWA | 405 | 561 | 0.0 | 793.8 | 3.0e-33 | 4.0e-30 | 104.8 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 3 | VWA_2 | 405 | 554 | 0.0 | 305.0 | 2.7e-10 | 3.6e-07 | 30.4 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 3 | VWA_3 | 405 | 543 | 1.6e-40 | 138.3 | 0.00017 | 0.23 | 11.1 |
| pfu_aug1.0_1.1_00019.t1 | 6 | 3 | vWA-TerF-like | 441 | 543 | 2.5e-09 | 37.2 | 0.18 | 250.0 | 1.3 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 1 | VWA_CoxE | 456 | 496 | 8.9e-13 | 47.8 | 0.96 | 1300.0 | -1.7 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 2 | VWA_CoxE | 615 | 756 | 8.9e-13 | 47.8 | 1.9e-06 | 0.0026 | 16.9 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 4 | VWA | 619 | 794 | 0.0 | 793.8 | 1.10001e-40 | 1.5e-37 | 129.0 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 4 | VWA_2 | 619 | 782 | 0.0 | 305.0 | 3.0e-19 | 4.1e-16 | 59.5 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 4 | VWA_3 | 619 | 759 | 1.6e-40 | 138.3 | 1.4e-06 | 0.0018 | 17.9 |
| pfu_aug1.0_1.1_00019.t1 | 6 | 4 | vWA-TerF-like | 656 | 749 | 2.5e-09 | 37.2 | 2.6e-05 | 0.035 | 13.9 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 1 | EGF | 806 | 835 | 1.1e-25 | 89.1 | 2.2e-07 | 0.0003 | 20.7 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 1 | EGF_2 | 806 | 837 | 4.5e-06 | 26.7 | 0.0015 | 2.0 | 8.6 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 5 | VWA | 846 | 999 | 0.0 | 793.8 | 2.1e-30 | 2.8e-27 | 95.5 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 5 | VWA_2 | 846 | 1000 | 0.0 | 305.0 | 5.0e-10 | 6.7e-07 | 29.5 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 5 | VWA_3 | 846 | 985 | 1.6e-40 | 138.3 | 0.00015 | 0.2 | 11.3 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 2 | EGF | 1033 | 1063 | 1.1e-25 | 89.1 | 1.3e-09 | 1.7e-06 | 27.8 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 2 | EGF_2 | 1033 | 1064 | 4.5e-06 | 26.7 | 0.0014 | 1.9 | 8.7 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 6 | VWA | 1073 | 1107 | 0.0 | 793.8 | 5.4e-06 | 0.0073 | 16.0 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 6 | VWA_2 | 1073 | 1115 | 0.0 | 305.0 | 0.24 | 320.0 | 1.3 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 6 | VWA_3 | 1073 | 1101 | 1.6e-40 | 138.3 | 0.17 | 230.0 | 1.4 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 3 | EGF | 1152 | 1183 | 1.1e-25 | 89.1 | 1.5e-10 | 2.1e-07 | 30.7 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 3 | EGF_2 | 1152 | 1184 | 4.5e-06 | 26.7 | 0.00034 | 0.46 | 10.7 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 3 | VWA_CoxE | 1192 | 1310 | 8.9e-13 | 47.8 | 0.0071 | 9.6 | 5.2 |
| pfu_aug1.0_1.1_00019.t1 | 6 | 5 | vWA-TerF-like | 1192 | 1309 | 2.5e-09 | 37.2 | 3.7e-06 | 0.005 | 16.6 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 7 | VWA | 1193 | 1366 | 0.0 | 793.8 | 0.0 | 3.78351e-44 | 150.5 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 7 | VWA_2 | 1193 | 1349 | 0.0 | 305.0 | 1.4e-18 | 1.9e-15 | 57.4 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 7 | VWA_3 | 1193 | 1344 | 1.6e-40 | 138.3 | 3.1e-06 | 0.0042 | 16.8 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 4 | EGF | 1379 | 1409 | 1.1e-25 | 89.1 | 8.1e-10 | 1.1e-06 | 28.4 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 4 | EGF_2 | 1379 | 1410 | 4.5e-06 | 26.7 | 3.4e-06 | 0.0046 | 17.0 |
| pfu_aug1.0_1.1_00019.t1 | 4 | 4 | VWA_CoxE | 1417 | 1555 | 8.9e-13 | 47.8 | 2.3e-07 | 0.00031 | 19.9 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 8 | VWA | 1419 | 1587 | 0.0 | 793.8 | 7.1e-37 | 9.6e-34 | 116.6 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 8 | VWA_2 | 1419 | 1586 | 0.0 | 305.0 | 1.9e-20 | 2.5e-17 | 63.5 |
| pfu_aug1.0_1.1_00019.t1 | 8 | 8 | VWA_3 | 1419 | 1542 | 1.6e-40 | 138.3 | 8.7e-10 | 1.2e-06 | 28.3 |
| pfu_aug1.0_1.1_00019.t1 | 6 | 6 | vWA-TerF-like | 1420 | 1533 | 2.5e-09 | 37.2 | 0.35 | 470.0 | 0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1.1_00019.t1 | gi|47219204|emb|CAG11222.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00019.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00019.t1 atgttggaattctgcaaggagtttctggcaaactcagacatagattcagggagtgttcgtgtaggcattctcagttacag cacagcagtgcacattcatttttacctggacagtttttccaacactaatgacatgttcaacgctattgatacaattccat ggaactatggaagtacgaacaccgctgacggactaaaaacaatgagaaaccaattatttacttcgtcccgaggagataga cctgatgtgaagaacgtggccatcataattaccgatggtgtctcaaatatcaacgcgagagacaccattccacaatcgga agcagcaaggaatgatgggatacatgtttacgccattggtattggattatcagacagaacagaacttgacgcaattgcgt ccgttcccgcttcggaaaatagttttgctgtgcagagttttgatgaactgaagggccttgataagaagatattccagtcc atctgtccaggatccatagtaacacgaaggccgacaactcgtgcaccagtaacaatacgggcacctgtgactacacgggc acccgtgaccacgcttcgttcaacaacaccagctccaacgaccactgccaagccacctcttgacctcggatatgacgtgg ttatcgtaatggactcctccgtacctaacagacaattcggttggatgaaggacttcgttagaaacatagcccagtccttc agcatcgatgacgaggaatttaaggttggtctcttacgatacagcacgaatccaagtgtacaatggcagctgaatgagta cgatcgcaaaaatgacgtcatcagggctgttgatcgcgtcagtcgtagaagaggacgaaggaacactgctcaagcaattg actacgtcaagaacgagatgttcaggagacgaaatggcgacagagatattgcacgtaacttcattattttgttgacgggg caagatgaaagtccggaccgataccgggcatggcagtcagccgaaaatgcggaagttgatgggataagactttttactgt gggaatcaacttaagggacactacagaaattgatgaaatttcaagtcatccattatcaacatatagatatcttatcaaca gagaaagtgatttacgaagggtcccggatcagatgagagacgctttgaggagaacaactacaacaacagctgcgcctttg gattccggatatgacgtcgtcatcgttatggactcatctgtaccacgtgatacctttgattggatgaagggctttgttcg ctccatatccgagtcattcagtatagacaacgaagaatacaaagtgggcgtgctcaggtactcgtcttacccggaagttc agtggaatcttagagaatacagcaccaaaaacgatatcataagagccgtaaatagaatcggatacagacctggtcgtaca aatacagcacaagctctagaatatgtaaaaaactccatgttcaggcgaagcgccggcgatcgagatttcgcacgagattt catcattctcttgacaggtcaggacgatagtactgacaaataccgggcatgggctgcagccgaaaaagcggaaaatgagg gaattcgtgtttttacggttggaattaatttgaatgatacatccgagatagatgaaatatcaagtcatcctctgacaaca tatagatacctcgtcaggaagcagagtgatctactagcggtaccggggatcatgaaattgtcactgaatgacatgccaga gcgaccagaacctgccagaccgcgaccagtgagaccgaccacaccccctcctcctacaacgactcgtaaaccaggaaagt gtaattcttccggagatatcgtctttatcctggattcctccggcagcgtaggtagagatcaattctacaaggttcttaac tttacctacaccaccgtatctgaccttgacattgatacaggacacttcaggatcgccgttataacctttagtgacaatgc tagattggaatttaacttgaacagatatacgacgagagctgaggttgagggtgctctgcagcgtgtcagttatgtttatg gttcaacacacacggcggaggcacttcgaatggcacgagagcaagtcttcacagggtccggcggggatagaccagatgtt cccaatgttgtcatcatcgtcacggacggcgaatcaaatatcaacaacgaacagacgataccggaagctagacaactaaa gagcaccggcgtgaccatgattactgtggccgtaggctttgcacaaagaacgaccgagctgattggtttaacatcgaagc caatcaacgacaacttagttcgagttgaaaattatgacgctctccataacttgaaggataaattggttgcgccgctttgc tctgatgagaaccagtgtcgaaacaacccgtgtcagaatggaggcttctgtctggacggacttggaagttatcagtgcgt ctgcgtcaacggtcactatggagacaattgcgagaaaaaatgtggtgatgctgcggacgtcgttttcgtattggattcgt caacaacagtcggaagagaaacattcgagcgcatgcgcagatatacatcatacctgatcagagaaatggacgcagaagag tgtaatattagaattggagtcctcaaatacagttctgcaccaatggttcagttccagatcggaacttatacggacacgga cacaatggtttacgctgttgacaatatcggctacacacgtgggcgggccaacatggccgctgctttcagatctttaagaa cccgtatgtttaatggcggcggtgaccgcccgggagtgagaaacatcgcttacttgttgacagacggctctgctgacgtg aatgctgagaacaccttgagagaggcggagctcgccatggaagccgatataaggatcattccgattggcgtagagatgag gcagcgtgacgaagttaataacattgcattctctcaaggcatcagcactattgaaatcatgaacgacgaagatgatgcta atatacgaggacttagagatcagatattgtcaccggtattcgataacgttgattactgcgctggagatccgtgtgaaaat ggcgggaaatgtaaggtcgctaatggtggatacacatgcgagtgcgtccctggatacacgggagataactgcaatagacg gtgtaatgcaagaggagatgtcgtattcgttgtcgatacgtctagatatgtcggtcgtaaagagcttcgctatatcaagc gatttatgcggtccatcgtcagacgtatcgagctctccggttctgaccaagatttcctatcatacgccgtatcctcccca ttgccctcatacctccatgtgacaccagatgtctctggtcttgatgctatttctgataatttgatgagcttcttctgtaa cgatcacaatgcatgcgcatcgaatccatgtgaaaatggcggagaatgtgtaaacatgcagaatggagcgtatgaatgcc ggtgtagacgaggattctctggcagaaactgtcagcaagcttgtggcggcaaagcggacttgattttcctcttagactca tccggaagtgtgggtagaaaacacttccgtaacattaagcagttcgtatacagtatagttgaccaattgacaatcggtcc agacgacacgagggttgccgtggcaacgtatagctcgaaagcccggatgggattccacctagaccagtactattccaaac agaagatacagaacgctatttctgccatggaatatagatacgggaacaccaatacagcaggaggtttaaagatggtgcgg aggaatatactatctagtcagagaggagacaggccaaacgttcctaatatattggttgttgttactgacggagtttccaa cgtgaaccctgagaacaccataccccaggcaggctttatcaaggactcgggtacgcacatcttcgctatcggcgtcggag gtttccaacccgacgagttgaacgccattgccagcgaaccggcggctgacaacgcattcctcgtttccgattattcagat ttgttcactctgtcggatacgatcgtcagtggaacatgtaaagacgagtcggtgtgttctaccaatccttgtcgtaatgg tggtacctgtatagcggaaataaacggattcagctgtaaatgtccacgagggttcaatggaccttattgcggaaacgaat gcgcctcggaaaaggacattgttttcgtcctcgactcatcgtccagcgtaggagagaagaacttcaacagtatgcttgat tttgtccaagcgttattggaggagctttcatcgggaaataacagaaataaatttgctatggtcacttacagtactgatgt taatctcattttcagttttagtcgatactcagacacttcttctctaacttccgccgtatccacagttcggtatactccgg gatctacgaacactgccggaggtctacgatctgcattcgaacttctccaaggaaattacggttctagacgaagtgctgaa gatatagtagtgttactgacagacggacagtcgaacgtaaactcgtatgatactgttcccgcagcggaaacgttgaaagc ttccggtgcgcatattatcggaatcggtatcggattaagtgatgccaccgaacttaataatgtcgtttccggtactgatg acgttttccaggcctctagttttgaaacgcttaaaactgtaaaggcagatattgttagcaatacatgtgcaagaggctaa |
|
Protein
| Protein ID | pfu_aug1.0_1.1_00019.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00019.t1 MLEFCKEFLANSDIDSGSVRVGILSYSTAVHIHFYLDSFSNTNDMFNAIDTIPWNYGSTNTADGLKTMRNQLFTSSRGDR PDVKNVAIIITDGVSNINARDTIPQSEAARNDGIHVYAIGIGLSDRTELDAIASVPASENSFAVQSFDELKGLDKKIFQS ICPGSIVTRRPTTRAPVTIRAPVTTRAPVTTLRSTTPAPTTTAKPPLDLGYDVVIVMDSSVPNRQFGWMKDFVRNIAQSF SIDDEEFKVGLLRYSTNPSVQWQLNEYDRKNDVIRAVDRVSRRRGRRNTAQAIDYVKNEMFRRRNGDRDIARNFIILLTG QDESPDRYRAWQSAENAEVDGIRLFTVGINLRDTTEIDEISSHPLSTYRYLINRESDLRRVPDQMRDALRRTTTTTAAPL DSGYDVVIVMDSSVPRDTFDWMKGFVRSISESFSIDNEEYKVGVLRYSSYPEVQWNLREYSTKNDIIRAVNRIGYRPGRT NTAQALEYVKNSMFRRSAGDRDFARDFIILLTGQDDSTDKYRAWAAAEKAENEGIRVFTVGINLNDTSEIDEISSHPLTT YRYLVRKQSDLLAVPGIMKLSLNDMPERPEPARPRPVRPTTPPPPTTTRKPGKCNSSGDIVFILDSSGSVGRDQFYKVLN FTYTTVSDLDIDTGHFRIAVITFSDNARLEFNLNRYTTRAEVEGALQRVSYVYGSTHTAEALRMAREQVFTGSGGDRPDV PNVVIIVTDGESNINNEQTIPEARQLKSTGVTMITVAVGFAQRTTELIGLTSKPINDNLVRVENYDALHNLKDKLVAPLC SDENQCRNNPCQNGGFCLDGLGSYQCVCVNGHYGDNCEKKCGDAADVVFVLDSSTTVGRETFERMRRYTSYLIREMDAEE CNIRIGVLKYSSAPMVQFQIGTYTDTDTMVYAVDNIGYTRGRANMAAAFRSLRTRMFNGGGDRPGVRNIAYLLTDGSADV NAENTLREAELAMEADIRIIPIGVEMRQRDEVNNIAFSQGISTIEIMNDEDDANIRGLRDQILSPVFDNVDYCAGDPCEN GGKCKVANGGYTCECVPGYTGDNCNRRCNARGDVVFVVDTSRYVGRKELRYIKRFMRSIVRRIELSGSDQDFLSYAVSSP LPSYLHVTPDVSGLDAISDNLMSFFCNDHNACASNPCENGGECVNMQNGAYECRCRRGFSGRNCQQACGGKADLIFLLDS SGSVGRKHFRNIKQFVYSIVDQLTIGPDDTRVAVATYSSKARMGFHLDQYYSKQKIQNAISAMEYRYGNTNTAGGLKMVR RNILSSQRGDRPNVPNILVVVTDGVSNVNPENTIPQAGFIKDSGTHIFAIGVGGFQPDELNAIASEPAADNAFLVSDYSD LFTLSDTIVSGTCKDESVCSTNPCRNGGTCIAEINGFSCKCPRGFNGPYCGNECASEKDIVFVLDSSSSVGEKNFNSMLD FVQALLEELSSGNNRNKFAMVTYSTDVNLIFSFSRYSDTSSLTSAVSTVRYTPGSTNTAGGLRSAFELLQGNYGSRRSAE DIVVLLTDGQSNVNSYDTVPAAETLKASGAHIIGIGIGLSDATELNNVVSGTDDVFQASSFETLKTVKADIVSNTCARG |
|