Gene
| Gene Model ID | pfu_aug1.0_1.1_00024 |
|---|---|
| Locus | scaffold1.1 : 373056 ... 377112 : + |
| To GenomeBrowser | scaffold1.1:373056..377112 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug2.0_304.1_13974 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00024.t1 | 4 | 1 | LRR_8 | 136 | 169 | 5.5e-13 | 48.4 | 0.00044 | 0.94 | 9.2 |
| pfu_aug1.0_1.1_00024.t1 | 8 | 1 | LRR_1 | 137 | 151 | 5.5e-07 | 28.7 | 0.56 | 1200.0 | 0.3 |
| pfu_aug1.0_1.1_00024.t1 | 6 | 1 | LRR_4 | 139 | 175 | 5.0e-06 | 26.0 | 4.3e-06 | 0.0091 | 15.6 |
| pfu_aug1.0_1.1_00024.t1 | 4 | 2 | LRR_8 | 158 | 203 | 5.5e-13 | 48.4 | 7.6e-13 | 1.6e-09 | 37.3 |
| pfu_aug1.0_1.1_00024.t1 | 6 | 2 | LRR_4 | 159 | 197 | 5.0e-06 | 26.0 | 3.1e-08 | 6.6e-05 | 22.4 |
| pfu_aug1.0_1.1_00024.t1 | 8 | 2 | LRR_1 | 159 | 180 | 5.5e-07 | 28.7 | 0.005 | 11.0 | 6.5 |
| pfu_aug1.0_1.1_00024.t1 | 8 | 3 | LRR_1 | 182 | 201 | 5.5e-07 | 28.7 | 0.00047 | 0.99 | 9.6 |
| pfu_aug1.0_1.1_00024.t1 | 8 | 4 | LRR_1 | 213 | 229 | 5.5e-07 | 28.7 | 0.42 | 890.0 | 0.6 |
| pfu_aug1.0_1.1_00024.t1 | 6 | 3 | LRR_4 | 214 | 225 | 5.0e-06 | 26.0 | 0.34 | 730.0 | -0.1 |
| pfu_aug1.0_1.1_00024.t1 | 8 | 5 | LRR_1 | 274 | 286 | 5.5e-07 | 28.7 | 0.7 | 1500.0 | 0.0 |
| pfu_aug1.0_1.1_00024.t1 | 6 | 4 | LRR_4 | 275 | 296 | 5.0e-06 | 26.0 | 0.038 | 81.0 | 3.0 |
| pfu_aug1.0_1.1_00024.t1 | 6 | 5 | LRR_4 | 434 | 446 | 5.0e-06 | 26.0 | 0.28 | 600.0 | 0.2 |
| pfu_aug1.0_1.1_00024.t1 | 4 | 3 | LRR_8 | 434 | 446 | 5.5e-13 | 48.4 | 0.088 | 190.0 | 1.9 |
| pfu_aug1.0_1.1_00024.t1 | 8 | 6 | LRR_1 | 434 | 446 | 5.5e-07 | 28.7 | 0.053 | 110.0 | 3.4 |
| pfu_aug1.0_1.1_00024.t1 | 4 | 4 | LRR_8 | 456 | 498 | 5.5e-13 | 48.4 | 2.2e-06 | 0.0047 | 16.6 |
| pfu_aug1.0_1.1_00024.t1 | 8 | 7 | LRR_1 | 456 | 473 | 5.5e-07 | 28.7 | 0.0024 | 5.1 | 7.5 |
| pfu_aug1.0_1.1_00024.t1 | 6 | 6 | LRR_4 | 457 | 468 | 5.0e-06 | 26.0 | 0.053 | 110.0 | 2.5 |
| pfu_aug1.0_1.1_00024.t1 | 8 | 8 | LRR_1 | 481 | 496 | 5.5e-07 | 28.7 | 0.067 | 140.0 | 3.1 |
| pfu_aug1.0_1.1_00024.t1 | 1 | 1 | TIR_2 | 640 | 716 | 3.0e-06 | 27.3 | 3.0e-09 | 6.3e-06 | 26.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1.1_00024.t1 | gi|195503963|ref|XP_002098877.1| | Tl [Drosophila yakuba] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00024.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00024.t1 atggacatcacgaagatgttcagtgtattgataatttttcatttgattattatatttacagtagcagaatgtaaaggttt ggggcctttgggtcgataccctccaaattgttatccgaaagaaaactacacagcgtacgaacaatcttcttttcgttcag acttattttgtccccaggagtataacaacaaagcttgcgaggaatataaatccatagcatgtgcatgtaatgcgataccc atttggatgatcaacaagtctcctgttcttccgttagagctggagtacatagggagaaaaggaatcgctatcctgatccc cgatgggaaaggaacatctctgcaccgcttggttcacagtgaaggatttttagcggaaatgcctatgaatttatgtgact atccttcaattgttgaaatcgtcctgtctaagaatcgaatcaccaggatggaatctgtgagttgtttacaggagcttgat acgattgacatgagttataatcttttaacaaagttgtcaaacctaacttttcagaacctgagcaaacttagagtgataga tctgtcttacaatcgaatacatcaaatagatcctcaaacattctaccagactggattgcaaccacttcatccgatgacaa tcaacgtgtctgacaatcaactcgaaggaatcgatttttcaaagtttaacgttgttttgttgaacatatcctgcctagta gtgtacaaaaggaatttattaagtgttatgaaaaatgaattaaacttcaaaatcaatgcgttagattatgaaatgaacaa tcctgattatggaggtagggtggatgtgtctgaaaataagataaattatttaccaaatccagagctttttggactgaaga gcatactcgaatacgctcaactgaaagataatcatttttttatcagtttcaagaacaacccgttgatatgtgactgtaat tggatttggacatatgaatacgcccttagtatattaaggcactatcaagtaggcatcattcctttcggtttccagtgtaa aaagtcagcgtcactggaggaggaagtcagattgaagtcagtaaacgataaaatcactgacgaaattctatctaaactcc aatgtcatccatacagttgtccctcaaattgctcatgctcattcatagcagttactaatagaattgttattgattgcaaa ggagccgggatatccgaatttaaggggataaatctgaacccttcattttggagagtcatgtacgtggatgttattcacag gttcaaggaagcggctcttcatttacatctttctgaaaataatttgcgattcattccttataaggttgaaattatcaata gaacaaagagtcttgatttgtcaaagaacagattaaaacatattcatacatcagctttaaggattctcccgagggacgct cggcttaacataagttataatgatgacataaaaacgcttccacgtgcaattttacgtttccacatcgacaacattgactt gtcagggttaaagctggaatgctcttgcaatgacgtcaacaaaatgtatgaatggctgccagactttttaaaatcaaagg aaacctcgaactttcggacacccctctgcaatatagatggcaagatagtggaagcaaatgtcgtaactgcggattacctc gggtgtaatgacaacattatcttagaaaacagatttattttcagtgccgttggtctattaacaatttcagttgttttgat cggatttattatagcctttcgtttggaactattcattttatatcgaaaaatgcgacagcgggaacattgttacaaacaat atgaatatgatatatacatatcaatggacgatggaaatgagctcttgctgagatggatgttacaccgattctgtcctgct ttaaaaaaacatggttataaagtttattttcctcccagggacatgagtgtcggctgctttagagaggagtctatcagaaa aacaatagagcgcagtagatgtgtcatagggttcataaccctgtcattcgctagggagattgatgagtggatggctcttg aatggaggatagcgtggcaaaagtacatatcagtgtatgatagaaaactaatatgcattaattacgatcagttgcgatat agagacatagaatggcctattttacagaaattccttagatggggaacatgtattgatttttgcacgcgacgaaagtttat caaaacatgtatggatgaagtaggaaatccaggtggaagtatgaatatgcttaaagtgagcaaacctaagttcaacccgt ttgagatttactttgaaaggaaaactgcgccttccaatgaatga |
|
Protein
| Protein ID | pfu_aug1.0_1.1_00024.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00024.t1 MDITKMFSVLIIFHLIIIFTVAECKGLGPLGRYPPNCYPKENYTAYEQSSFRSDLFCPQEYNNKACEEYKSIACACNAIP IWMINKSPVLPLELEYIGRKGIAILIPDGKGTSLHRLVHSEGFLAEMPMNLCDYPSIVEIVLSKNRITRMESVSCLQELD TIDMSYNLLTKLSNLTFQNLSKLRVIDLSYNRIHQIDPQTFYQTGLQPLHPMTINVSDNQLEGIDFSKFNVVLLNISCLV VYKRNLLSVMKNELNFKINALDYEMNNPDYGGRVDVSENKINYLPNPELFGLKSILEYAQLKDNHFFISFKNNPLICDCN WIWTYEYALSILRHYQVGIIPFGFQCKKSASLEEEVRLKSVNDKITDEILSKLQCHPYSCPSNCSCSFIAVTNRIVIDCK GAGISEFKGINLNPSFWRVMYVDVIHRFKEAALHLHLSENNLRFIPYKVEIINRTKSLDLSKNRLKHIHTSALRILPRDA RLNISYNDDIKTLPRAILRFHIDNIDLSGLKLECSCNDVNKMYEWLPDFLKSKETSNFRTPLCNIDGKIVEANVVTADYL GCNDNIILENRFIFSAVGLLTISVVLIGFIIAFRLELFILYRKMRQREHCYKQYEYDIYISMDDGNELLLRWMLHRFCPA LKKHGYKVYFPPRDMSVGCFREESIRKTIERSRCVIGFITLSFAREIDEWMALEWRIAWQKYISVYDRKLICINYDQLRY RDIEWPILQKFLRWGTCIDFCTRRKFIKTCMDEVGNPGGSMNMLKVSKPKFNPFEIYFERKTAPSNE |
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