Gene
| Gene Model ID | pfu_aug1.0_1.1_00025 |
|---|---|
| Locus | scaffold1.1 : 378466 ... 405897 : + |
| To GenomeBrowser | scaffold1.1:378466..405897 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug2.0_304.1_13975 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00025.t1 | 14 | 1 | LRR_4 | 80 | 110 | 3.1e-15 | 55.3 | 0.0099 | 12.0 | 5.6 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 1 | LRR_8 | 94 | 142 | 3.4e-31 | 106.7 | 5.6e-09 | 7.0e-06 | 25.7 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 2 | LRR_4 | 98 | 131 | 3.1e-15 | 55.3 | 1.3e-05 | 0.016 | 14.8 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 1 | LRR_6 | 113 | 127 | 1.9e-06 | 27.3 | 0.023 | 29.0 | 5.1 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 3 | LRR_4 | 115 | 156 | 3.1e-15 | 55.3 | 0.00018 | 0.23 | 11.1 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 1 | LRR_1 | 115 | 134 | 4.8e-12 | 44.1 | 0.00014 | 0.17 | 11.9 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 2 | LRR_6 | 146 | 157 | 1.9e-06 | 27.3 | 0.92 | 1100.0 | 0.2 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 2 | LRR_8 | 236 | 290 | 3.4e-31 | 106.7 | 5.4e-07 | 0.00066 | 19.3 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 2 | LRR_1 | 236 | 250 | 4.8e-12 | 44.1 | 0.23 | 290.0 | 2.1 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 3 | LRR_1 | 258 | 272 | 4.8e-12 | 44.1 | 0.015 | 18.0 | 5.8 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 3 | LRR_6 | 258 | 268 | 1.9e-06 | 27.3 | 0.26 | 330.0 | 1.8 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 4 | LRR_4 | 259 | 270 | 3.1e-15 | 55.3 | 0.16 | 200.0 | 1.7 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 4 | LRR_1 | 283 | 298 | 4.8e-12 | 44.1 | 0.16 | 200.0 | 2.6 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 5 | LRR_4 | 537 | 567 | 3.1e-15 | 55.3 | 0.0099 | 12.0 | 5.6 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 3 | LRR_8 | 551 | 599 | 3.4e-31 | 106.7 | 5.6e-09 | 7.0e-06 | 25.7 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 6 | LRR_4 | 555 | 588 | 3.1e-15 | 55.3 | 1.3e-05 | 0.016 | 14.8 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 4 | LRR_6 | 570 | 584 | 1.9e-06 | 27.3 | 0.023 | 29.0 | 5.1 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 7 | LRR_4 | 572 | 613 | 3.1e-15 | 55.3 | 0.00018 | 0.23 | 11.1 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 5 | LRR_1 | 572 | 591 | 4.8e-12 | 44.1 | 0.00014 | 0.17 | 11.9 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 5 | LRR_6 | 603 | 614 | 1.9e-06 | 27.3 | 0.92 | 1100.0 | 0.2 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 4 | LRR_8 | 693 | 747 | 3.4e-31 | 106.7 | 5.4e-07 | 0.00066 | 19.3 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 6 | LRR_1 | 693 | 707 | 4.8e-12 | 44.1 | 0.23 | 290.0 | 2.1 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 7 | LRR_1 | 715 | 729 | 4.8e-12 | 44.1 | 0.015 | 18.0 | 5.8 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 6 | LRR_6 | 715 | 725 | 1.9e-06 | 27.3 | 0.26 | 330.0 | 1.8 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 8 | LRR_4 | 716 | 727 | 3.1e-15 | 55.3 | 0.16 | 200.0 | 1.7 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 8 | LRR_1 | 740 | 755 | 4.8e-12 | 44.1 | 0.16 | 200.0 | 2.6 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 5 | LRR_8 | 972 | 1011 | 3.4e-31 | 106.7 | 0.35 | 430.0 | 0.7 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 9 | LRR_4 | 988 | 1016 | 3.1e-15 | 55.3 | 0.018 | 22.0 | 4.7 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 10 | LRR_4 | 1003 | 1039 | 3.1e-15 | 55.3 | 8.4e-06 | 0.01 | 15.4 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 7 | LRR_6 | 1020 | 1035 | 1.9e-06 | 27.3 | 0.56 | 690.0 | 0.9 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 6 | LRR_8 | 1022 | 1067 | 3.4e-31 | 106.7 | 7.8e-12 | 9.6e-09 | 34.8 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 11 | LRR_4 | 1023 | 1062 | 3.1e-15 | 55.3 | 1.7e-08 | 2.2e-05 | 23.9 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 9 | LRR_1 | 1023 | 1044 | 4.8e-12 | 44.1 | 0.096 | 120.0 | 3.3 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 8 | LRR_6 | 1044 | 1057 | 1.9e-06 | 27.3 | 0.028 | 34.0 | 4.9 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 10 | LRR_1 | 1046 | 1065 | 4.8e-12 | 44.1 | 0.00045 | 0.55 | 10.4 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 12 | LRR_4 | 1078 | 1089 | 3.1e-15 | 55.3 | 0.82 | 1000.0 | -0.6 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 11 | LRR_1 | 1078 | 1090 | 4.8e-12 | 44.1 | 0.82 | 1000.0 | 0.5 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 7 | LRR_8 | 1136 | 1157 | 3.4e-31 | 106.7 | 0.26 | 320.0 | 1.1 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 13 | LRR_4 | 1136 | 1157 | 3.1e-15 | 55.3 | 0.0018 | 2.3 | 7.9 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 12 | LRR_1 | 1136 | 1148 | 4.8e-12 | 44.1 | 0.4 | 500.0 | 1.4 |
| pfu_aug1.0_1.1_00025.t1 | 8 | 8 | LRR_8 | 1296 | 1308 | 3.4e-31 | 106.7 | 0.37 | 460.0 | 0.6 |
| pfu_aug1.0_1.1_00025.t1 | 14 | 14 | LRR_4 | 1296 | 1308 | 3.1e-15 | 55.3 | 0.65 | 810.0 | -0.2 |
| pfu_aug1.0_1.1_00025.t1 | 13 | 13 | LRR_1 | 1296 | 1309 | 4.8e-12 | 44.1 | 0.049 | 61.0 | 4.2 |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00025.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00025.t1 atgacgtcatcaattttccatgactattatatggattggagttttgttggagatatccaactttcattgaagtacagcat gatgcgtcaaataaacgtacatgtacatgtaaatgagtcaaagaagaccctgacgacaatctcaacagtaaagtaactgg aatatatcgggataaaaggatttgctattttgaccagctttggtgaaggaacatctttgcaccgcttggttcacagcaac gggatattagcggaattgcctagaaatttatgtgactttccttcaattgttgaaattattctgtcaaagaaccgcatcac acggatggaatctaagttaagcaaattaagagtgatagatctttcttacaatcgaataaaacatatagatccaaatacat tcttacagactggattacagtcacttcatccgatgacaatcaacgtgtctgacaataaactggaaagaatcgatttttca aacgtttttatgttaaatatatcctgcgtagtagtgtacaaaaggaatttgataagaaatattacgaatgaattaaactt caaaattgatgcgttagattatgaaatgaacaatcctgattttggaggagccgtgatatccgaatttaaggggataaatc tgaatccttcatcttggagagtcatgtacgtggatgttattcacaaattcaatgaggcggctcttcgtttacatctttct aaaaattctttgcggtacattccttataatgttgaaattataaacagaacaaagagtcttgatttgtctaagaacagatt aaaacatattcatacagcagctttaaggattctcccgagggacgctcggctaaactttagtcacaacgatgatctaaaaa ctctcccacgtgcaattttacgtttccacatcgacaacattgatttgtcagggttaaagctggaatgctcttgcaatgac gtcaacaaaatgtatcaatggctaccagactttttaaaatcaaaggaaacctcagacattcggacacccctctgcaatat tgatggcaagatagtggaagcaaatattgttactgcggaatacctcgggtgtaatgacaactttatcttaaaaaacaagt ttattttcagtgcatttggtctattaacaatttcagttgttttgatcggatttattttcgcctttcgtttggaaatacac attttatatagaaaaatgcgacagttggaaagtagtaacaaacaatatgcatatgatatatacatatcaatggacgatgg aaatgagctcttgctgagatggatgttacaccgattctgtcctgctttagaaacacatggttataaagtttattttcctt ccagggacatgagtgtcggctgctttagagaggaggacgacgtccgaagtaaacttaaacctcaacagaccatgaccatt ggcgaacttagaggagaagtgggggcacaagcccaccttcgatgtcaattacaaaatatgttcttactaacgctgcttca acaaaaactggaatatatcgggataaaaggatttgctattttgaccagctttggtgaaggaacatctttgcaccgcttgg ttcacagcaacgggatattagcggaattgcctagaaatttatgtgactttccttcaattgttgaaattattctgtcaaag aaccgcatcacacggatggaatctaagttaagcaaattaagagtgatagatctttcttacaatcgaataaaacatataga tccaaatacattcttacagactggattacagtcacttcatccgatgacaatcaacgtgtctgacaataaactggaaagaa tcgatttttcaaacgtttttatgttaaatatatcctgcgtagtagtgtacaaaaggaatttgataagaaatattacgaat gaattaaacttcaaaattgatgcgttagattatgaaatgaacaatcctgattttggaggagccgtgatatccgaatttaa ggggataaatctgaatccttcatcttggagagtcatgtacgtggatgttattcacaaattcaatgaggcggctcttcgtt tacatctttctaaaaattctttgcggtacattccttataatgttgaaattataaacagaacaaagagtcttgatttgtct aagaacagattaaaacatattcatacagcagctttaaggattctcccgagggacgctcggctaaactttagtcacaacga tgatctaaaaactctcccacgtgcaattttacgtttccacatcgacaacattgatttgtcagggttaaagctggaatgct cttgcaatgacgtcaacaaaatgtatcaatggctaccagactttttaaaatcaaaggaaacctcagacattcggacaccc ctctgcaatattgatggcaagatagtggaagcaaatattgttactgcggaatacctcgggtgtaatgacaactttatctt aaaaaacaagtttattttcagtgcatttggtctattaacaatttcagttgttttgatcggatttattttcgcctttcgtt tggaaatacacattttatatagaaaaatgcgacagttggaaagtagtaacaaacaatatgcatatgatatatacatatca atggacgatggaaatgagctcttgctgagatggatgttacaccgattctgtcctgctttagaaacacatggttataaagt ttattttccttccagggacatgagtgtcggctgctttagagaggagaaatatgacaatgagatttgcgaaggccgatata aatttattgcatgtgcatgttgtgcagttcctatctggataatagacaagtctcctgtacttccggtagaactggaatat atcgggataaaaggatttgctattttgaccagctttggtgaaggaacatctttgcaccgcttggttcacagcaacgggat attagcgaaattgcctagaaatttatgtgactttccttccattgttgaaattattctgtcaaagaaccgcatcacaagga tggaatctgtgagttgtttaaaggagcttgacacgattgatatgagttataatctcataacaaaggtgtctaatctaact tttcagaagttaagcaaattaagagtgatagatctttcttacaatcgaataaaacatatagatccgtatacattcataca gactggattacagccacttcatccgatgacaatcaacgtgtctgacaatcaactggaaagaatcgatttttcaaacgttt ttatgttaaatatatcctgcgtagcagtgtacaaaaggaatttgataagaaatatcacgaatgaattaaacttcaaaatt gatgcgttagattatgaaatgaacaatcctgattttggaggtagggtagatttgtctgaaaataagataaattatttacc aaatccagagctttttggactgaagaacctattggaatacgctcaactaaaagataatcattttatgatcagtttcaaag acaacccgttgatatgtgactgtaattggatatggacatttcaaaacgcccttgacgtaatacggcgctatcccataggc ataaatcctttcggtttcaattgtaaaaaagcggcgtcacagacagaagacgtgagatgggggtcatatcatgatcatat cactgatgaaactttatctaaatttcaatgtcatccatacagttgtccctcaaattgctcatgctcattcataccaacta ataataaaattgttattgactgcaaaggagccgcgatatccgaatttaaggggataaatctgaatccttcatcttggaga gtcatgtacgtggatgttattcacaaattcaacgatgcggctcttcatttacatctttctgaaaattctttgcagtacat tccttataatgtttaa |
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Protein
| Protein ID | pfu_aug1.0_1.1_00025.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00025.t1 MTSSIFHDYYMDWSFVGDIQLSLKYSMMRQINVHVHVNESKKTLTTISTVKXLEYIGIKGFAILTSFGEGTSLHRLVHSN GILAELPRNLCDFPSIVEIILSKNRITRMESKLSKLRVIDLSYNRIKHIDPNTFLQTGLQSLHPMTINVSDNKLERIDFS NVFMLNISCVVVYKRNLIRNITNELNFKIDALDYEMNNPDFGGAVISEFKGINLNPSSWRVMYVDVIHKFNEAALRLHLS KNSLRYIPYNVEIINRTKSLDLSKNRLKHIHTAALRILPRDARLNFSHNDDLKTLPRAILRFHIDNIDLSGLKLECSCND VNKMYQWLPDFLKSKETSDIRTPLCNIDGKIVEANIVTAEYLGCNDNFILKNKFIFSAFGLLTISVVLIGFIFAFRLEIH ILYRKMRQLESSNKQYAYDIYISMDDGNELLLRWMLHRFCPALETHGYKVYFPSRDMSVGCFREEDDVRSKLKPQQTMTI GELRGEVGAQAHLRCQLQNMFLLTLLQQKLEYIGIKGFAILTSFGEGTSLHRLVHSNGILAELPRNLCDFPSIVEIILSK NRITRMESKLSKLRVIDLSYNRIKHIDPNTFLQTGLQSLHPMTINVSDNKLERIDFSNVFMLNISCVVVYKRNLIRNITN ELNFKIDALDYEMNNPDFGGAVISEFKGINLNPSSWRVMYVDVIHKFNEAALRLHLSKNSLRYIPYNVEIINRTKSLDLS KNRLKHIHTAALRILPRDARLNFSHNDDLKTLPRAILRFHIDNIDLSGLKLECSCNDVNKMYQWLPDFLKSKETSDIRTP LCNIDGKIVEANIVTAEYLGCNDNFILKNKFIFSAFGLLTISVVLIGFIFAFRLEIHILYRKMRQLESSNKQYAYDIYIS MDDGNELLLRWMLHRFCPALETHGYKVYFPSRDMSVGCFREEKYDNEICEGRYKFIACACCAVPIWIIDKSPVLPVELEY IGIKGFAILTSFGEGTSLHRLVHSNGILAKLPRNLCDFPSIVEIILSKNRITRMESVSCLKELDTIDMSYNLITKVSNLT FQKLSKLRVIDLSYNRIKHIDPYTFIQTGLQPLHPMTINVSDNQLERIDFSNVFMLNISCVAVYKRNLIRNITNELNFKI DALDYEMNNPDFGGRVDLSENKINYLPNPELFGLKNLLEYAQLKDNHFMISFKDNPLICDCNWIWTFQNALDVIRRYPIG INPFGFNCKKAASQTEDVRWGSYHDHITDETLSKFQCHPYSCPSNCSCSFIPTNNKIVIDCKGAAISEFKGINLNPSSWR VMYVDVIHKFNDAALHLHLSENSLQYIPYNV |
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