Gene
| Gene Model ID | pfu_aug1.0_1.1_00026 |
|---|---|
| Locus | scaffold1.1 : 412814 ... 428535 : - |
| To GenomeBrowser | scaffold1.1:412814..428535 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug2.0_538.1_27515 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1.1_00026.t1 | 1 | 1 | NACHT | 162 | 331 | 5.4e-08 | 32.6 | 2.2e-11 | 3.3e-07 | 30.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1.1_00026.t1 | gi|260791293|ref|XP_002590674.1| | hypothetical protein BRAFLDRAFT_89475 [Branchiostoma floridae] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_1.1_00026.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00026.t1 atgctctttccagactatcccgaccaagcgccgaccatttcacgactacaaagagagcggttaagtatcccgtatttttt cgaccggttgaaagaatacgggaaactttttccgacctctaaagagtgcccgctccaataccgatcgattgtggaccaac attcgctgcaccagaccaagatacgactaagagccgttcacttccaacatggcagttttcgaggtatggaatacagggtt aagcaattgcaatcgcttctctacgatcttcacttggaagaaacaaaaaatatccctgtttcaccatttttcaaaaaagg tgtcttacctatagaggaactctatgtacctgtcatcattagagaagacttagagtacagcaacaaagtaaggcaccttc ttaggcaacggaaagtcgttgacttaaagagacgcctgcacaaccctagggatttgttttggatcgaagggaaaatgacg aggaatgtttatatgcgcggcgaggcggctcgtgggaagtctttgttttgtcgcaagttattgaaggattggtgctctgg aattaaacacgtcgatagttctgctgatattggagaatgggagaaagaattgcgaagctttccattcctatttttcatat ctctgaggcatgtggacccatcacatacatcagtgattgatatgatctgttggggtatatttggacgtaaaccaacatgt cacgagaccatacaccacgtaatatcgagtaccgagtacagatgcttagtggttatagatggtcttgatgaatggagatt ctctcaagaagcgaagacgaaactaagacacgaaggacttcctatctcagacaatatggaaaactccacgattttttgga cctcgaggcactgggcttttgatgaagtaattgattcagtacacagtaaagatcgggtagttgacatagagggacttgat gaagttggtcaacaacaggccattgaaaatatccttattaattactacgaccttgaaagaaactccgttgagtactctac ctcactttctgaggtgacgcacaagctgaagaatttatcatgccagtcaattatacaggtccccttgttaacatttgcat gtgtacagatttgttacgaagaaaaatccgttggaaagggaatgacaagtctgtatacagctttgataaatatgctgatt ggcagagccttaaagaagaaagatatcgaccaggactcgcctcaactgtttactgagcatctaggaaaatatcagacttt aactgaaaggataaaaagtaaccaacatgtcaaagatttcattccccttttaggtaggttaggtgaaattgcatatcatg atcttatttcaaacgaaacgcatcttgtttttcaaagaagggaacttcaaaacaaattgggaaaatcatacttggacatt gctctgaaaataggtttacttagtcaaagcgcagctccgggtgcatgttacgaagacaatgttagcttgaatttcttcca caaatctatacaagagttcatcgcggcagtctttattgcaagtgaagatggaatgggtgaatccttttgcaaacgtctat ccagtatcaaaatcattaccgaagtggaaaatgttattatatttctatcaggattacatccctatataggttgcatggca acagaatatattcttcgagcatctgatgaagatagtgacatacagaattatagagaaacgttttatgataagcacaacga tttagttacaaggctgttcaaactacagcttaactgctatagagatatcagacaaacccagaaaaatacaaatacatctc aggttttaaggtgttgtgtttctgatattctactgaacagcgatagtgacacagatgacatcctaaatactgctcacatg ctttcacattatcaaggcaaggttcgctcgttgtctttactcgagataagaaatgatattaagtcgggaataacagacaa atcattgactaagtttcttaagcacacagatacgctacaatcactcaacatcgatagcttcaacatccctcgaaccttaa gcaaaatcagccgaaaattttcctcgatgacgtctatagcattatatggagttaaactaactagtgccgctttgttttca ttacaaacatacttatcgtcaaatgacgtccttcttattgatcaggaggataaacgtgtcttcttggaagtattagacaa actatcacatttgaaatgtatagattactacggtatatataatgaggacgaaatggagcccgagaagcacgagaaaattc tagacaagaaagaatgtaaaatgcacaggtttcactccactgtccggaatttgcgtgacatacacatttttacgattgct tccttagaatttgatgacgtcacaatcagtctacgtcagataccgtctccaatgggaagtagctgtggttttcgaaaata g |
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Protein
| Protein ID | pfu_aug1.0_1.1_00026.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1.1_00026.t1 MLFPDYPDQAPTISRLQRERLSIPYFFDRLKEYGKLFPTSKECPLQYRSIVDQHSLHQTKIRLRAVHFQHGSFRGMEYRV KQLQSLLYDLHLEETKNIPVSPFFKKGVLPIEELYVPVIIREDLEYSNKVRHLLRQRKVVDLKRRLHNPRDLFWIEGKMT RNVYMRGEAARGKSLFCRKLLKDWCSGIKHVDSSADIGEWEKELRSFPFLFFISLRHVDPSHTSVIDMICWGIFGRKPTC HETIHHVISSTEYRCLVVIDGLDEWRFSQEAKTKLRHEGLPISDNMENSTIFWTSRHWAFDEVIDSVHSKDRVVDIEGLD EVGQQQAIENILINYYDLERNSVEYSTSLSEVTHKLKNLSCQSIIQVPLLTFACVQICYEEKSVGKGMTSLYTALINMLI GRALKKKDIDQDSPQLFTEHLGKYQTLTERIKSNQHVKDFIPLLGRLGEIAYHDLISNETHLVFQRRELQNKLGKSYLDI ALKIGLLSQSAAPGACYEDNVSLNFFHKSIQEFIAAVFIASEDGMGESFCKRLSSIKIITEVENVIIFLSGLHPYIGCMA TEYILRASDEDSDIQNYRETFYDKHNDLVTRLFKLQLNCYRDIRQTQKNTNTSQVLRCCVSDILLNSDSDTDDILNTAHM LSHYQGKVRSLSLLEIRNDIKSGITDKSLTKFLKHTDTLQSLNIDSFNIPRTLSKISRKFSSMTSIALYGVKLTSAALFS LQTYLSSNDVLLIDQEDKRVFLEVLDKLSHLKCIDYYGIYNEDEMEPEKHEKILDKKECKMHRFHSTVRNLRDIHIFTIA SLEFDDVTISLRQIPSPMGSSCGFRK |
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