Gene
| Gene Model ID | pfu_aug1.0_10.1_21905 |
|---|---|
| Locus | scaffold10.1 : 71136 ... 84050 : + |
| To GenomeBrowser | scaffold10.1:71136..84050 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug2.0_492.1_07589 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10.1_21905.t1 | 1 | 1 | Ldl_recept_a | 9 | 46 | 3.4e-06 | 26.8 | 3.0e-09 | 3.4e-06 | 26.8 |
| pfu_aug1.0_10.1_21905.t1 | 2 | 1 | LRR_8 | 83 | 142 | 1.6e-19 | 69.4 | 7.2e-18 | 8.2e-15 | 54.3 |
| pfu_aug1.0_10.1_21905.t1 | 2 | 1 | LRR_4 | 83 | 123 | 2.0e-10 | 40.0 | 9.9e-09 | 1.1e-05 | 24.8 |
| pfu_aug1.0_10.1_21905.t1 | 3 | 1 | LRR_1 | 83 | 105 | 5.0e-08 | 31.9 | 1.4e-05 | 0.015 | 15.1 |
| pfu_aug1.0_10.1_21905.t1 | 3 | 2 | LRR_1 | 108 | 124 | 5.0e-08 | 31.9 | 0.13 | 150.0 | 3.0 |
| pfu_aug1.0_10.1_21905.t1 | 2 | 2 | LRR_4 | 110 | 145 | 2.0e-10 | 40.0 | 1.1e-08 | 1.3e-05 | 24.6 |
| pfu_aug1.0_10.1_21905.t1 | 2 | 2 | LRR_8 | 127 | 160 | 1.6e-19 | 69.4 | 8.1e-09 | 9.2e-06 | 25.3 |
| pfu_aug1.0_10.1_21905.t1 | 3 | 3 | LRR_1 | 131 | 152 | 5.0e-08 | 31.9 | 0.00026 | 0.29 | 11.2 |
| pfu_aug1.0_10.1_21905.t1 | 1 | 1 | 7tm_1 | 209 | 465 | 8.3e-31 | 107.0 | 9.7e-34 | 1.1e-30 | 106.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10.1_21905.t1 | gi|1169995|sp|P46023.1|GR101_LYMST | G-protein coupled receptor GRL101 [Lymnaea stagnalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_10.1_21905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10.1_21905.t1 atgttttacgttgtagcctcggctaattgcacgtctgagcaattcaaatgtcgtaattcatattgtgtggacttggactc cagatgtgacgggcggttagattgtcctaaatggtcgtacgaggacgaactcggatgtccctatacgtgtccatttcgga cgaacgaatgcatttgtaatgacgacgaacttaactgcactcagaggggtcttcgatctattcctactgaccttgaattg gagaatcaactgacgaaattagatctgagcaataattcaattgaaatcattccacaaggctgtttccagtatctataccg gctattgaccttatatctggaagggaacgctatcgccgacattcaatcatttggacttacgggtctctccaatctacaga ccttggacctaagtcatcaacgtattaaggagatcctccccagtactttcatcgggctcagaagtgtctacaaattatac acagacgagtttccattctgctgtttggcgcgctatgtacacaaatgttatcccgaacccgacgagttttcctcgtgtga agacctgatgtccaactatctgttacgtgtggctgtctggatattgggcatattagcgtttcttggaaatattttggttt tcatttggcgcatacatgataacagaaacggaaaggttcattcattcttaattacaaatcttgctattggagatttcttt atgggggtatacttacttataatagccgtcgtggatagttattatagaggaaagtactttatatcagataaaacatggcg ggaaagtgacttgtgtaaattcgcaggattcatatcaactttttctagtgagttatcggtgtttacattgacaatcatca ctatagacagacttatttgtattatattcccattgaaactgaaaagattgggaataaaggagatgctgattgtaatgcca tgtatttggattttagtgacagttctctctggagcaccgctgttcggaatagactatttcgagaacttttacggtcgttc tggggtatgtctggctttgcatatcactccagaaaaaccgaaaggctgggagtattcagtatttgtgtttttagttttaa atttagtgtcatttctcacgatattaatttcatacttgtggatgtttcttgtcgctaagcagactactactgcagtgcgt aaatcaaaggccaaatccgacaaatctatggccaagaggatgaccctaattgttatgtcagacttctgctgttggattcc aatcatcttgttagggtttgcttcattaggtggagctcatgtgccaccacaggtgtatgcctgggtggcggtgtttgttt tacctttgaattctgccatgaacccaattctgtataccatctccactgcgccattcatgagaaatatccgtaaacgagtc caacgattccggaaatccttcactgggtcgcttcgcacaagaaagtag |
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Protein
| Protein ID | pfu_aug1.0_10.1_21905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10.1_21905.t1 MFYVVASANCTSEQFKCRNSYCVDLDSRCDGRLDCPKWSYEDELGCPYTCPFRTNECICNDDELNCTQRGLRSIPTDLEL ENQLTKLDLSNNSIEIIPQGCFQYLYRLLTLYLEGNAIADIQSFGLTGLSNLQTLDLSHQRIKEILPSTFIGLRSVYKLY TDEFPFCCLARYVHKCYPEPDEFSSCEDLMSNYLLRVAVWILGILAFLGNILVFIWRIHDNRNGKVHSFLITNLAIGDFF MGVYLLIIAVVDSYYRGKYFISDKTWRESDLCKFAGFISTFSSELSVFTLTIITIDRLICIIFPLKLKRLGIKEMLIVMP CIWILVTVLSGAPLFGIDYFENFYGRSGVCLALHITPEKPKGWEYSVFVFLVLNLVSFLTILISYLWMFLVAKQTTTAVR KSKAKSDKSMAKRMTLIVMSDFCCWIPIILLGFASLGGAHVPPQVYAWVAVFVLPLNSAMNPILYTISTAPFMRNIRKRV QRFRKSFTGSLRTRK |
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