Gene
| Gene Model ID | pfu_aug1.0_10.1_21910 |
|---|---|
| Locus | scaffold10.1 : 138166 ... 154501 : + |
| To GenomeBrowser | scaffold10.1:138166..154501 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug2.0_5317.1_26059 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10.1_21910.t1 | 1 | 1 | RVT_1 | 2 | 124 | 1.9e-18 | 66.6 | 2.4e-21 | 7.2e-18 | 64.7 |
Transcript
| Transcript ID | pfu_aug1.0_10.1_21910.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10.1_21910.t1 atgaatggagcaaaagtgttttctactttcgatttgacatgtggataccaccagatacctgtaaaacctgaggatgttcc aaagacagcttttgtaaccaaatatggattatacgagttcacttctatgccatttggattgtgcaactcagcggcgacct tccaacgagtcatggaaattgcactcaacggactacaatggcttacctgtttaatctacatagatgacattatagtcttt ggtaccaatgtacagcagaatcttgagagagttgatcaagtattgaataggatcacagaagcaggattggagttaaaacc tgaaaaatgcgaactacttaagtcagaagtctcgtttctaggacacaaaattaatgaagaaggaatcaaacctgagcctg acaacatagccaaaattctgtcttgcccaaccccaaaaactgtgactgatgtccgacaattcctcggaatgggaagttac tataggcgttttgtaaacaacttctctcaaatagtagcaccaatggtaaatttaacaaagaaacacgtaccatttcattg ggacgagacctgtgaaaatgccttccagagcctgaaacaagcactaactagtccaagcattatggcctaccctaaagacg aaggagactttatactagattgcgatgctagtcatgaagcgattggtgcagtattaagtcagaagcaagatgatgtagag cgcattatagcatacggcagtagaactctcaacaaggcagagaagaattattgcattacggataaagaacttttggccat tcgatatttcattgaatactacaggcagtatcttctaggcagacaatttaaagtgagaaccgaccaccaagcacttgttt ggttgtttaaattaaaggaaccaaaaggacgaattgccagatggattgagatcctatccccatataatttcaccattgaa tatcaacctggacagaagcaccaaaatgcagatgcgatgtcaagaatctgcaatcctagagactgttcatgtggagatgt tgacacattggaacttctgaagtgtggaccatgtcataagtgtgtaaggaaaacagagatgatgtgcggtacaataatgt tgaaccaagagaaagacacaggccaaaacgaaagtgagagtaaagtgaataaggtagcaactagatcagaagccatgaca gaaccactatcaagctttggcgtctacactactgcagaacttgagaaattccaaaagggcgatgaaaacttaaagcgagt tatggaatggtgtcatcaaggcaaaagaccagagtacaaggacatcatagcattaagtccagaactacaacattattggc agctttggccctccacacatttgataaagggtgttctctataagaatttctacaagaaagatggaaccgcccactacata cagttaatggtacccaaaaggttgagaagtgaagtcctgagacaaatgcatgacagtttatatagcggtcatctaggaca aaagaaaacaaaactcagaacacaacaaagattttactggtatgaaatgcgtgaggatgccaatgtatgggtagcgagtt gtgatgtctgtggaaggaacaaaccagaaaatagaaagcctaaagcagccttaggtgacatgagatttaaacaggtaaat ttcagcatttttactcgtcttcattctcgttgtttttggttcagcgccattgttggcctgggcggaaaaaagaaaacatc agatgtgaataccaaacacagacaatcaaaagacagagtaaatgagaccaaagaagaaatagaagagattctcaccaagc tacagagtacacatgagctttttgatgaaaagatatcaaagatggagtggaaaataaatacactaaaagaaaagagtgag agagttgaagagctaaagcttagagaatcaaagatgaaagagttgcagtcaactaaacaagatttaggaggctttgaaaa gagaattggagacctgaaggaaaaaatacggaacaaaatgatgctttgtaagaacttggaaattacagtttctgcagtag attaccaacaaaattacaaagcccagaaagccaagaaaagaaaagctgaattagatagcctcagaagtatcaaagaaaag cttgagcagatgagtggtcttagttttcttccatcatctccttcctcgattaaagtacagctgaatggatcaggcaaatc cattgatgatctgaagctaaccctgaccatggagtttggggtgataccatttggacttcatctgacagcagctcaggtca acgtaaacagcttatacatagatgacatcctggagatagccatcaaaacaaatgatgtaccgatgtttataacagccgtc agacaaagatggcaaacacattatcctctagctcaagaaatgcttcatatagctaaaaaccatgctgtagattggatcag agaggagggtattgtcagagtgttactgggtgccacaggatcggcaatctgtacattatcactgccgtcaacatatccag cctcaggtgatatcagcctgctcaggataggtggcattgatattaacatacaggatgtggtgcctcctccaagcaccaaa agtttaacagactgggtactgtttcttgaagacaaatttggaaatatttaa |
|
Protein
| Protein ID | pfu_aug1.0_10.1_21910.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10.1_21910.t1 MNGAKVFSTFDLTCGYHQIPVKPEDVPKTAFVTKYGLYEFTSMPFGLCNSAATFQRVMEIALNGLQWLTCLIYIDDIIVF GTNVQQNLERVDQVLNRITEAGLELKPEKCELLKSEVSFLGHKINEEGIKPEPDNIAKILSCPTPKTVTDVRQFLGMGSY YRRFVNNFSQIVAPMVNLTKKHVPFHWDETCENAFQSLKQALTSPSIMAYPKDEGDFILDCDASHEAIGAVLSQKQDDVE RIIAYGSRTLNKAEKNYCITDKELLAIRYFIEYYRQYLLGRQFKVRTDHQALVWLFKLKEPKGRIARWIEILSPYNFTIE YQPGQKHQNADAMSRICNPRDCSCGDVDTLELLKCGPCHKCVRKTEMMCGTIMLNQEKDTGQNESESKVNKVATRSEAMT EPLSSFGVYTTAELEKFQKGDENLKRVMEWCHQGKRPEYKDIIALSPELQHYWQLWPSTHLIKGVLYKNFYKKDGTAHYI QLMVPKRLRSEVLRQMHDSLYSGHLGQKKTKLRTQQRFYWYEMREDANVWVASCDVCGRNKPENRKPKAALGDMRFKQVN FSIFTRLHSRCFWFSAIVGLGGKKKTSDVNTKHRQSKDRVNETKEEIEEILTKLQSTHELFDEKISKMEWKINTLKEKSE RVEELKLRESKMKELQSTKQDLGGFEKRIGDLKEKIRNKMMLCKNLEITVSAVDYQQNYKAQKAKKRKAELDSLRSIKEK LEQMSGLSFLPSSPSSIKVQLNGSGKSIDDLKLTLTMEFGVIPFGLHLTAAQVNVNSLYIDDILEIAIKTNDVPMFITAV RQRWQTHYPLAQEMLHIAKNHAVDWIREEGIVRVLLGATGSAICTLSLPSTYPASGDISLLRIGGIDINIQDVVPPPSTK SLTDWVLFLEDKFGNI |
|