Gene
| Gene Model ID | pfu_aug1.0_100.1_43470 |
|---|---|
| Locus | scaffold100.1 : 52100 ... 77085 : - |
| To GenomeBrowser | scaffold100.1:52100..77085 |
| Genes list of scaffold | scaffold100.1 |
| Synonym | pfu_aug2.0_427.1_24012 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_100.1_43470.t1 | 14 | 1 | Spectrin | 15 | 84 | 0.0 | 219.3 | 6.1e-06 | 0.03 | 14.6 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 2 | Spectrin | 124 | 204 | 0.0 | 219.3 | 0.0019 | 9.4 | 6.5 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 3 | Spectrin | 269 | 372 | 0.0 | 219.3 | 1.4e-09 | 6.7e-06 | 26.3 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 4 | Spectrin | 376 | 481 | 0.0 | 219.3 | 3.2e-13 | 1.6e-09 | 38.0 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 5 | Spectrin | 488 | 591 | 0.0 | 219.3 | 2.1e-09 | 1.0e-05 | 25.7 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 6 | Spectrin | 596 | 700 | 0.0 | 219.3 | 2.5e-05 | 0.13 | 12.6 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 7 | Spectrin | 707 | 804 | 0.0 | 219.3 | 1.1e-08 | 5.2e-05 | 23.4 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 8 | Spectrin | 810 | 872 | 0.0 | 219.3 | 0.0011 | 5.6 | 7.2 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 9 | Spectrin | 891 | 993 | 0.0 | 219.3 | 3.2e-12 | 1.6e-08 | 34.7 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 10 | Spectrin | 1002 | 1039 | 0.0 | 219.3 | 0.003 | 15.0 | 5.9 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 11 | Spectrin | 1019 | 1078 | 0.0 | 219.3 | 3.6e-06 | 0.018 | 15.3 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 12 | Spectrin | 1090 | 1181 | 0.0 | 219.3 | 0.0059 | 29.0 | 4.9 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 13 | Spectrin | 1188 | 1290 | 0.0 | 219.3 | 7.3e-16 | 3.6e-12 | 46.4 |
| pfu_aug1.0_100.1_43470.t1 | 14 | 14 | Spectrin | 1295 | 1402 | 0.0 | 219.3 | 1.4e-10 | 6.9e-07 | 29.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_100.1_43470.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_100.1_43470.t1 atggataagaaggcagatttgctacagtctgtatccatcaaggaacaatatgagaaaatgttacaggattacgcggaatt cctagaaactgccagcgagaaactgaaagtagaatccatatctgtgcgcgacctggaacaccttaaacagatgctcgcag ctcataaagatttcttcagtgacttagaagtacacagagccatgttagataacttagccgctcaaacaaatcaggctgcc cgtcagaaacatatagctcaacatactcgtttgaataatctcacctatgttattctggacaaggctagtttacacggcca aaaactcgaaagacttgttcgtcagtggatagaattagctgatcgccatcggcagctacagagtttccttgacgacgtgg aacaacaaatacctcgtcctgtagccagtaatgaagctgtcgtgacaatacaagaaaaaataaatacatatcgcagactg caacgggagcttaacgaagagagaccaatcttgttccaagttgtagacaaggggaaacaactcttgcatagtttgaattg tcctattttagaaacagaagttacagaacttgcagatagatttgtggaccttaactcagggatttcacaggaactcaaaa gtgacaaattataccccccgcgggacgttttttctctaaacaaattcatttatgacttatcacagaaagctctggtcata aggaatctatatgttaaacatcatggccaaattccttacaaggaggttctacaccaagctcagatggacctcatgccgtc acgtcaagctctcaacgaactcgggacctggctcgacattatggaaatagccgttagagacgaaaaagctaaacctgtca aaaacctggcagacattgatgtagtactgaagaaattcaaggacttcaagatagagttacagagtaaacagctaacagtg gactttgtgaaccagtctgtcctacagtctcctgaagccgacatttcaacaccagtcacctcagaccaaacagattttgc cgagcgtttgggtcacctgaacaaacgctggcagggcctggatcatgatgtcaaacagacactgaagaacttagagactc tacacaataaatggcaggagtacgagcgtgcccttggcagagtacaggagtggttcatagagcaggaagacaaggtggcg aggtatcacctgattggtcatgaagtcagtgttaaacagaccatcagagactgtaaggccctacaagaagccttgaagtc taaagaggaagagattgacagtgtacggaaactcggagaacgactcgtggatttaagctacaactcccccaactgtcagg aaagtatccaggcaagtctagacagacttaaccaacaatggcgccacctggcgagcaaggtccaggaacttcagaacgtc ctggatgacttcctttctcagtggaactcgtaccacgctgagttacagagcaccaatcagattctgtcggaagtggagta ctcattgagtagatataacaaagtgggagctgacctcaccacactcacaatgcaggttgacaaactcaagagtcttaacg atgagatgcagagagggtcggctggttttgagagatttgtaaagttgggtacccagctcaatcaagtatgtgaagcccca gtcagacaggaaatacagaataccctgacagacgtacaagcaaggtggcgtcgtatgagtgcagaattgcgtgatcgtca taagcgattccagcagtgtcaccagcaatggcagcagtatgaagaggagtacacgcgcgccaggatctggctcgagaaca aggaacagcacttcaacgaactggccgcgtataaagatgatactagacgcagggaagactgcctcaaacatagcaaggtt ttgatgaaagatctggacaattttacttccactttatctcagctgtaccaactcagtgatgctgtgactaaaaacatgga ctcttctagtatcgtaacaattacctcacggcaaacgggactagagcagcgagttttaacgctacgtcaggctctcgcca aacaaatacagacactacaaggtgatctctctcagaaacaaagatttaaggatctatacagtgccatgaccatttttctt accaatgcggaacgaactcttggtgatgaagaactcagcaaatctaccgacccacaaactttacgaaatcggtacgatga gctaaaaaatcttacgcagcagtttaacaaccaaatggttcagcttgatgcactgaatgatctgggttatagaatggctc tcagtgaggagacgtcaaaagacttgcgggatctcaatcataaatggcaggacctatatgctgaaacaaaggagagaaac aagacacttcaaggtctcttactggtacagcaggacttcagtgaaaaatgtgacacatggatgacattcctggctcagac agagagtgacctggcgacagagatagccggtaatctgccagatctacagagacagctacgccagtgtgagaaagcagacg ataacgctagggaggaggtcaaggtcaaaatatcccagcttcagcaccagagccatggaattgtgggtaaactggaaagt catgtgaccagactgactgatgttttaaaacaatggcaagagtgtgaggaggacattgaggacatcctgacctggttaaa ggacactagaaaaaccttgacctctgaccttccaacatcatatgacctactccaaacagaacttaccaaatgcaaggata tagagacagcttttgcaagttcagaaaataaacgtcaaaatttactgcggaaagagaaaagacttgccgagattctacag ccggatgacctgaatgtattacaccaaaggatccgcctcctgaacaaacagtgggatgaacttcataaccaggcattcca gagggcacagcgtatccatgacaacatgttccgctggtccagcttcggggaccgtatcagagatttccatgagtggatgg atgacatggagaggaagagggaggtgcatgagcacttgaaagaccttgagaatataaacttgcagtaccgtaaacttgcg cgcgagggacgtacagaccactcaggtcaactcaaacagaaaatgacggactgtaacacacgatgggataaactacagca gcaggtatctaatatgatgcagagattgaaggaatcggcgagcatgaaggaagattacgtcacgaacagggacatgctgt ataactggcttacggagatggacgtacaaatcacgaacatagaacatttatcgtctatggatatacctacaaaaatggca gaaatgaagtctcagtacatggatgaatgcagcaggagtgtagagagagttcggcagctagatagagttatcaaaagtga gaccggtattggttatatagcatcagtagacgctgaagtcaaaaatgtattacatcgatgggaaatggtccaagcccaag ttgtggagaaggactttaaacttgtacagcatcgacatgactcagcccagttccatgccgatattaacaatatgctatcg tggctcgaccaggcagaaaaaatgcaaagggcaagaactgcactgccaggggacataactcaactagacgcaataattag acatcataaggagttcttaatgcagctagagactcgtaaaacgagagttcagtcaatcaacctcatcagtaaagatttca tagacttgcgcacggaagaagggaggcaactccgggacaaactgcagcaaatgaatcgaagatgggagaatatatgtatg agagcgacagagcttcaaagggagctccagggagccttgatgcagtgtcaggagttccaccataccatccatgatctgtt actttggttagagagtattgagaacaaagttcaacagtgtgagcctatcaatttgtcttcagatgaaagtgcactctggt caaagcatcggaaacttatagagctaagacttgatttagacagtaatcgagaccgtgtaatggcattgaaggacacggca gatcagttgctactgaataccgactccacagagatggtgaacgctaaggacaagatgcacattattgccaacaggttacg cgcgttacataggctatgttcatcgtatataactagtctggaggaccgattggaggtcaaaagtcgattatctccggtgg tggcccactttgttaccatgacaaccatgcatttgcgcattatggaacagatatttgccgtagcttctaacttgtcatct attgtttaa |
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Protein
| Protein ID | pfu_aug1.0_100.1_43470.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_100.1_43470.t1 MDKKADLLQSVSIKEQYEKMLQDYAEFLETASEKLKVESISVRDLEHLKQMLAAHKDFFSDLEVHRAMLDNLAAQTNQAA RQKHIAQHTRLNNLTYVILDKASLHGQKLERLVRQWIELADRHRQLQSFLDDVEQQIPRPVASNEAVVTIQEKINTYRRL QRELNEERPILFQVVDKGKQLLHSLNCPILETEVTELADRFVDLNSGISQELKSDKLYPPRDVFSLNKFIYDLSQKALVI RNLYVKHHGQIPYKEVLHQAQMDLMPSRQALNELGTWLDIMEIAVRDEKAKPVKNLADIDVVLKKFKDFKIELQSKQLTV DFVNQSVLQSPEADISTPVTSDQTDFAERLGHLNKRWQGLDHDVKQTLKNLETLHNKWQEYERALGRVQEWFIEQEDKVA RYHLIGHEVSVKQTIRDCKALQEALKSKEEEIDSVRKLGERLVDLSYNSPNCQESIQASLDRLNQQWRHLASKVQELQNV LDDFLSQWNSYHAELQSTNQILSEVEYSLSRYNKVGADLTTLTMQVDKLKSLNDEMQRGSAGFERFVKLGTQLNQVCEAP VRQEIQNTLTDVQARWRRMSAELRDRHKRFQQCHQQWQQYEEEYTRARIWLENKEQHFNELAAYKDDTRRREDCLKHSKV LMKDLDNFTSTLSQLYQLSDAVTKNMDSSSIVTITSRQTGLEQRVLTLRQALAKQIQTLQGDLSQKQRFKDLYSAMTIFL TNAERTLGDEELSKSTDPQTLRNRYDELKNLTQQFNNQMVQLDALNDLGYRMALSEETSKDLRDLNHKWQDLYAETKERN KTLQGLLLVQQDFSEKCDTWMTFLAQTESDLATEIAGNLPDLQRQLRQCEKADDNAREEVKVKISQLQHQSHGIVGKLES HVTRLTDVLKQWQECEEDIEDILTWLKDTRKTLTSDLPTSYDLLQTELTKCKDIETAFASSENKRQNLLRKEKRLAEILQ PDDLNVLHQRIRLLNKQWDELHNQAFQRAQRIHDNMFRWSSFGDRIRDFHEWMDDMERKREVHEHLKDLENINLQYRKLA REGRTDHSGQLKQKMTDCNTRWDKLQQQVSNMMQRLKESASMKEDYVTNRDMLYNWLTEMDVQITNIEHLSSMDIPTKMA EMKSQYMDECSRSVERVRQLDRVIKSETGIGYIASVDAEVKNVLHRWEMVQAQVVEKDFKLVQHRHDSAQFHADINNMLS WLDQAEKMQRARTALPGDITQLDAIIRHHKEFLMQLETRKTRVQSINLISKDFIDLRTEEGRQLRDKLQQMNRRWENICM RATELQRELQGALMQCQEFHHTIHDLLLWLESIENKVQQCEPINLSSDESALWSKHRKLIELRLDLDSNRDRVMALKDTA DQLLLNTDSTEMVNAKDKMHIIANRLRALHRLCSSYITSLEDRLEVKSRLSPVVAHFVTMTTMHLRIMEQIFAVASNLSS IV |
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