Gene
| Gene Model ID | pfu_aug1.0_100.1_43471 |
|---|---|
| Locus | scaffold100.1 : 77488 ... 110126 : - |
| To GenomeBrowser | scaffold100.1:77488..110126 |
| Genes list of scaffold | scaffold100.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_100.1_43471.t1 | 14 | 1 | Spectrin | 3 | 57 | 2.69999e-40 | 136.8 | 0.0077 | 16.0 | 5.8 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 2 | Spectrin | 70 | 109 | 2.69999e-40 | 136.8 | 0.026 | 56.0 | 4.0 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 3 | Spectrin | 140 | 240 | 2.69999e-40 | 136.8 | 1.5e-07 | 0.00033 | 20.9 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 4 | Spectrin | 249 | 347 | 2.69999e-40 | 136.8 | 3.1e-05 | 0.066 | 13.4 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 5 | Spectrin | 351 | 452 | 2.69999e-40 | 136.8 | 0.00012 | 0.26 | 11.6 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 6 | Spectrin | 460 | 555 | 2.69999e-40 | 136.8 | 8.6e-06 | 0.018 | 15.2 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 7 | Spectrin | 563 | 660 | 2.69999e-40 | 136.8 | 2.9e-07 | 0.00062 | 20.0 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 8 | Spectrin | 665 | 765 | 2.69999e-40 | 136.8 | 8.8e-13 | 1.9e-09 | 37.7 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 9 | Spectrin | 770 | 865 | 2.69999e-40 | 136.8 | 3.0e-06 | 0.0064 | 16.7 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 10 | Spectrin | 872 | 954 | 2.69999e-40 | 136.8 | 2.4e-11 | 5.1e-08 | 33.1 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 11 | Spectrin | 1025 | 1066 | 2.69999e-40 | 136.8 | 0.0046 | 9.8 | 6.5 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 12 | Spectrin | 1083 | 1121 | 2.69999e-40 | 136.8 | 0.012 | 25.0 | 5.2 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 13 | Spectrin | 1139 | 1167 | 2.69999e-40 | 136.8 | 0.0025 | 5.3 | 7.3 |
| pfu_aug1.0_100.1_43471.t1 | 14 | 14 | Spectrin | 1173 | 1199 | 2.69999e-40 | 136.8 | 0.31 | 650.0 | 0.6 |
Transcript
| Transcript ID | pfu_aug1.0_100.1_43471.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_100.1_43471.t1 aaactctcggatgatattaacaatcataacggttctgtggacggactacggaccaaggcatccagactgatccccaaaat cagccaacatgacaaggatctggtggaagatagaataagagcttcagaaagaaagtatggtgagatccagacacgagcgg acaaagctcacaaacagcaagacgcgttgtcagggacgctggatgacatcaaagcggaagtggacaagtacctagcgtgg ctgaccgacagggagaagacaatggcggaggacatacccctggggtatagtgtcaaggacgccgagacaaggttaaagga acataatgtaaacgtacagacacgttatgattccctgtccagtggtctgtctgatcacaacaatcatctgagggactgta tagccgcaaggaaagtgttcgaatccgacttacagaaaaacgacaaatggtgtaaagagacagagatcaaatgctccaca gagccttgtctggactgcgctgtagaagtactggaagaacagctcaggcaatacaagactttgtctaacacatcccgcat gtttgaatctctggtcaaaactatgcatgaagctggaaactcatttacaccacatctgtatgaagccgacacaccaaaac tccaacaacaactcgggtccgctgccgaaaagtacgaaagagttgatgcccttatcaaacaaaggattgcagcactagag ggcgctctgagctgcagaagtcaagtcgcagagaatatttctgaagccaaagctttattgacaaatgctcaagaggacat cagaaacataagtagatctctaggtccagaaattgttgatgcagaaaatgctctacagcaatatgagtctgtgggtgaaa agctgagtacataccatcctgccatcactcagctgaaccaagccgtggagagactgagagggagtggccagaataccgag gctgatgaaatcctgagattaacatctcagtttgaactactccaagatcaagtcgaccaacaaagcaaaaaatgtcagca aggattgttgctaaggcaacagtaccaggaccaaagagcagagttagaaacattattgagggactgtgaagatgaaatca actcagtatcagaactagggctaactattcctgttagaatagagaaacttgaagttcttgaacaagaagttgccatacag atggagcaagtcaaacacctatctcaacaacaggccagtaaatataacgctcatagtaaatcagtgccccaagaactgca actccagctagcgacggtgcaagaacaagctagtgaagtgtcagaactgatgaaaggtaaagaggaggagctgaggaaca ttaaagtggacagagaggaactgacggaggctttgagaggcctacaatcctggctcggtaatgctgatacgaggctccag gaacgagtggttaatataccagatagtcaactcagacataaggttcttgaacaagaagttgccatacagatggagcaagt caaacacctatctcaacaacaggccagtaaatataacgctcatagtaaatcagtgccccaagaactgcaactccagctag cgacggtgcaagaacaagctagtgaagtgtcggaactgatgaaaggtaaagaggaggagctgaggaacattaaagtggac agagaggaactgacggaggctttgagaggcctacaatcctggctcggtaatgctgatacaaggctccaggaacgagtggt caatataccagatagtcaactcagacataagcaacttttgtcggagtttgatgagtataaacctgtactggacaaactac gaactaaaggtagcgacttgatttgtcatacacctgattctttggagaaacagagggttcagagacttatatccgacaca aatagacagtggttagcattgcaggccaagtctgcggacaaatcaaacagactgaacgaggcagaggaattacaggctaa gtttaaggagacagccgatgctttgtcacgatgggcaagtagtgctgaggctactatagcaacggatccagaaagaactg attttgcgaaaattaaagagcaactgaggcagcacagaagattggccaaagacgtagatcagcagcaaggcaaagtttcc catctcaatgagctgctaaaacgcttagaccagagtgtggacgctggtcaggcgagagacaaactggcgaaactcaacag tacaatgttcaaaattcaatccgatgtttccagtaggcttaacacattagaggaaacaaacgaccagatagaggactatg aacacgagctgagagatctcaggaaatggatggacgatacacgtgctaatctgaccatgaaggaatccgccgtcaacctg aatgaccagctagcttttcacgagaaactactcgaagatattgagaaccgcaaaggaaaggcacttcttgtggcagaaaa gcaaacggagcttcagaagaccgggaaacctacctccaaacctcaacctgcatccaaactagccgccgagataacggagc tccaacagctggccagagatcagtgtgagacgttaaggcaggctgtggctcaacaggagcaatatgagcgggaaatcaag gagctcacaggagctatcagcgaggcgcaggagaaactactgacatcccctgtagaagcatctgatgtaggctcactcaa gaaacagattgaagagcacaatgacctcgcaaggaaaataaagtcgtatcaggctagagtcaacgacctaaacgaaaaaa gcagagacctttcgcgaaaaacagccaaacttggtcccgccatgtctgacaagctggctgatctcgggttttacccagca tctctttcctccctacgtttacccgcccaccctgactctgataaatcagcagccgacagcggagtttatgcttctccaag gagctcactcaacacgacccagcagacgatatctgatgacatcatcacgccagttaaacttctttctcgacagcttggcg ccaaagaacaggagctccacgccgcgcttcagaaacaggagcgctaccaacaaagcgtacaggatgtgacgtcaaggatg gagaaggtgaattcccgcctatccagagggttcccagccaccttcaacaacctggatcagcaactgaaggattacaagaa ggcagtaaaggacagagagagacatgatatagccctgacggcacacaaacgtcaagtgaaggacctagagaattggctgg aagagcagaggatcaggcaggcagccacgcccttaccctccgacagtgtgggcgaactcaaaaagagtctgcaagaaaac caggactctggtccaagaggatggataccatcgagtgaggtcagcggtcagttaaaggacgtacgtcagaatctactgga gctcagtgacctatggcagcagttacaaatgcaggtagaagatcggcaaatccgcctcgatcaggcgttagaattccaac agaagtaccaggatgcactgcagaacatatcgtcatggctagacctggcagaacagaagctgtttaacccagagggagat cgggactcacaagatagagtcagggaaaatgaggtataa |
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Protein
| Protein ID | pfu_aug1.0_100.1_43471.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_100.1_43471.t1 KLSDDINNHNGSVDGLRTKASRLIPKISQHDKDLVEDRIRASERKYGEIQTRADKAHKQQDALSGTLDDIKAEVDKYLAW LTDREKTMAEDIPLGYSVKDAETRLKEHNVNVQTRYDSLSSGLSDHNNHLRDCIAARKVFESDLQKNDKWCKETEIKCST EPCLDCAVEVLEEQLRQYKTLSNTSRMFESLVKTMHEAGNSFTPHLYEADTPKLQQQLGSAAEKYERVDALIKQRIAALE GALSCRSQVAENISEAKALLTNAQEDIRNISRSLGPEIVDAENALQQYESVGEKLSTYHPAITQLNQAVERLRGSGQNTE ADEILRLTSQFELLQDQVDQQSKKCQQGLLLRQQYQDQRAELETLLRDCEDEINSVSELGLTIPVRIEKLEVLEQEVAIQ MEQVKHLSQQQASKYNAHSKSVPQELQLQLATVQEQASEVSELMKGKEEELRNIKVDREELTEALRGLQSWLGNADTRLQ ERVVNIPDSQLRHKVLEQEVAIQMEQVKHLSQQQASKYNAHSKSVPQELQLQLATVQEQASEVSELMKGKEEELRNIKVD REELTEALRGLQSWLGNADTRLQERVVNIPDSQLRHKQLLSEFDEYKPVLDKLRTKGSDLICHTPDSLEKQRVQRLISDT NRQWLALQAKSADKSNRLNEAEELQAKFKETADALSRWASSAEATIATDPERTDFAKIKEQLRQHRRLAKDVDQQQGKVS HLNELLKRLDQSVDAGQARDKLAKLNSTMFKIQSDVSSRLNTLEETNDQIEDYEHELRDLRKWMDDTRANLTMKESAVNL NDQLAFHEKLLEDIENRKGKALLVAEKQTELQKTGKPTSKPQPASKLAAEITELQQLARDQCETLRQAVAQQEQYEREIK ELTGAISEAQEKLLTSPVEASDVGSLKKQIEEHNDLARKIKSYQARVNDLNEKSRDLSRKTAKLGPAMSDKLADLGFYPA SLSSLRLPAHPDSDKSAADSGVYASPRSSLNTTQQTISDDIITPVKLLSRQLGAKEQELHAALQKQERYQQSVQDVTSRM EKVNSRLSRGFPATFNNLDQQLKDYKKAVKDRERHDIALTAHKRQVKDLENWLEEQRIRQAATPLPSDSVGELKKSLQEN QDSGPRGWIPSSEVSGQLKDVRQNLLELSDLWQQLQMQVEDRQIRLDQALEFQQKYQDALQNISSWLDLAEQKLFNPEGD RDSQDRVRENEV |
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