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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10015.1_31861
Locus scaffold10015.1 : 12736 ... 20953 : +
To GenomeBrowser scaffold10015.1:12736..20953
Genes list of scaffold scaffold10015.1
Synonym pfu_aug2.0_1752.1_08560

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10015.1_31861.t1 gi|321458774|gb|EFX69836.1| hypothetical protein DAPPUDRAFT_61868 [Daphnia pulex] 4.0e-22

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
Dshape 1
mantle 1

Transcript
Transcript IDpfu_aug1.0_10015.1_31861.t1
Definition-
>pfu_aug1.0_10015.1_31861.t1
atgaacattaacatgcagtcattgaaaggtggcagagaccagattttactacaaaatcctttgagcggcttaaaaccctc
tctatacggcgttgtgtatccggaaaacaatagaacaaactcttatctcgccaagaaaacgcaaactgaacctcgtgtta
cagggaattataaggataaaactggaaccgcagaagatttgaacaaagtagttataactcaaggcaaatcacctgcaaaa
caaaataatacccagcttgaaaatacaaacaatggaggtcgtctgctaagcagactatcagacatcgttagtgggatctt
ctggtctccccgcctagaaaaggaatgtcctaaaggatttgcagacgacattcagcaagattggaaggacaaggccaaga
gcatgaaaattgtgaagatggaagaaggatgcggtaggatgcaaaatcgtttgatcactttcaaagacactacgcatgcg
tgtgcaagatatcgtctcaatacagatcagatgcagggagaaatattttcattttatcttgcgaaattactagggtataa
ataa

Protein
Protein IDpfu_aug1.0_10015.1_31861.t1
Definition-
>pfu_aug1.0_10015.1_31861.t1
MNINMQSLKGGRDQILLQNPLSGLKPSLYGVVYPENNRTNSYLAKKTQTEPRVTGNYKDKTGTAEDLNKVVITQGKSPAK
QNNTQLENTNNGGRLLSRLSDIVSGIFWSPRLEKECPKGFADDIQQDWKDKAKSMKIVKMEEGCGRMQNRLITFKDTTHA
CARYRLNTDQMQGEIFSFYLAKLLGYK

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