Gene
| Gene Model ID | pfu_aug1.0_1002.1_51156 |
|---|---|
| Locus | scaffold1002.1 : 889 ... 9473 : + |
| To GenomeBrowser | scaffold1002.1:889..9473 |
| Genes list of scaffold | scaffold1002.1 |
| Synonym | pfu_aug2.0_1237.1_24795 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1002.1_51156.t1 | 1 | 1 | p450 | 6 | 401 | 0.0 | 234.4 | 0.0 | 0.0 | 234.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1002.1_51156.t1 | gi|260830673|ref|XP_002610285.1| | hypothetical protein BRAFLDRAFT_115438 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1002.1_51156.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1002.1_51156.t1 atgatggagggactcaacagaagtgatagtgtgttagatggcagacctgatttctcagtatttgatcatttgttcaaagg aaataagcagagaggtgtattcactgccgattcagacctaaagaatgagataaagcgaaaattcatggttgaaagtttag atacacattgtacttctccatcaacaatagaagatgaaatcaagagggaaacattaaatctgatgtgttttttcctacag gagtcgggtccattcgatcctttagaatgtttgaaatttgctcatctgcatatcatgatgcttttgatttttgacgagag atttgattctgacgattttatcagggacagaatatttgaggcattggatgagcgctacgctagcttgaaaatcaaatttc accactattttccttcccttcagtctttctacaaagaaaatacgaaaaaattacttatgggttcggatatacttattaga tatgaaaaaatgctattaaatcagcataaggacacttacaatccaatgaaaatacgggatttagtggatcagatgcttct atttatagaaaccaatgaagacagtgagttgttagaatctgacgatatggatgatctattattagaactttcaggtgcgg gattttatacagtaccagccttgctttcatggttacttgcttatatggcagcatttcctgacgttcaacaaaagcttcaa aatgaaattgattccatcgttggtagggagcgctttccgtccctagaagacgagccctatctgccttataccattgctgt gatactagaagtccaacgagttgtaaccatcatgcctttgcttttgcctcatagagctgttaaaagttgtgtattccaag gatataacattcccaaggacagcttatacctgttcaatgtatggagtttacatcatgatcagagacactggaaaaaccct atgaaatttaaccctgatagatttttggatgaatcaggagcactctttattcctgactattttgttccgtttggtctggg ccacagacgatgcccgggtgagagccttgtggagatagaagtctatgtaatgtttacatgtattatgcaccagttacgtg tttgtgcttcaccacaagccagagaacttaatctagaggcagatttcagctatatattaactccaaaagatctaaaaata gaagtgaaggagagggataattaa |
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Protein
| Protein ID | pfu_aug1.0_1002.1_51156.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1002.1_51156.t1 MMEGLNRSDSVLDGRPDFSVFDHLFKGNKQRGVFTADSDLKNEIKRKFMVESLDTHCTSPSTIEDEIKRETLNLMCFFLQ ESGPFDPLECLKFAHLHIMMLLIFDERFDSDDFIRDRIFEALDERYASLKIKFHHYFPSLQSFYKENTKKLLMGSDILIR YEKMLLNQHKDTYNPMKIRDLVDQMLLFIETNEDSELLESDDMDDLLLELSGAGFYTVPALLSWLLAYMAAFPDVQQKLQ NEIDSIVGRERFPSLEDEPYLPYTIAVILEVQRVVTIMPLLLPHRAVKSCVFQGYNIPKDSLYLFNVWSLHHDQRHWKNP MKFNPDRFLDESGALFIPDYFVPFGLGHRRCPGESLVEIEVYVMFTCIMHQLRVCASPQARELNLEADFSYILTPKDLKI EVKERDN |
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