Gene
Gene Model ID | pfu_aug1.0_1002.1_51157 |
---|---|
Locus | scaffold1002.1 : 10562 ... 26435 : - |
To GenomeBrowser | scaffold1002.1:10562..26435 |
Genes list of scaffold | scaffold1002.1 |
Synonym | pfu_aug2.0_1237.1_24796 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1002.1_51157.t1 | 3 | 1 | Neur_chan_memb | 31 | 51 | 4.5e-07 | 29.9 | 0.23 | 1100.0 | -0.8 |
pfu_aug1.0_1002.1_51157.t1 | 3 | 2 | Neur_chan_memb | 312 | 364 | 4.5e-07 | 29.9 | 9.1e-11 | 4.5e-07 | 29.9 |
pfu_aug1.0_1002.1_51157.t1 | 3 | 3 | Neur_chan_memb | 385 | 409 | 4.5e-07 | 29.9 | 0.45 | 2200.0 | -1.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1002.1_51157.t1 | gi|256075014|ref|XP_002573816.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_1002.1_51157.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1002.1_51157.t1 atggaaagacatgcggatgcaaagatttcaaacagcattgaatcttccattgatggcgtaaagattgcggctcaacggtt tcggagatgtagaagaagatcctgccatgacaaggtcaataccatagctgcacataatttagcgaaaccttataagaagc aagtactcatggtgctataccaagtttgtgttattcgtgctgatcgagcaacagaaatgaccttcattgtatctgaaaat gaacaaaatcttaaagacatgattgatgaaactgtcaaggaagctattgaaagtactggcacatgcgatataactggcaa atcgaaatgtacgaaacaaaaatcttcaattttcaaacaatattttcattgtgactttgatcctgatgacttttcaaaaa tagaaattacattgcatctcacagacctgaacttgagtgaatactggaacccgctgctcatcattcagaaccttgttgac catacaaaacgtaagaaatggcaggagctcagctttaactcacggggccacgccttcatcgtagagtgtcggagaatcaa aggacatttctcagagacgctggaactagcagagtttccttttgatcatcagagtttgaacgttgtggtgacatcagagc tctcacaagagaagttacagatagttgaagatgatgaagacattagtagtattaacgtgtcttgtttcgtggacgagcaa gagtggtctctctttgatctggttgagtgcatttcaactgtcacaacaaaacagttctcacctaagcggaacattcggtt tccatgcctacaattaggttgctatgcagcgcgacgatccggtttcttcgtatggaatgttatattaataatggcattta taagtactagttgttttactacatttgccgtcaagccatcactacctcagaaccgcctccagctgtcaatcaccctgatg ctaaccacaaaagttttcaaactgattgtcataaacaacctgccaaaaatatcttacaacacgcgattggaccggtatat cttattctgcattgtattcaacttcatagtgacagtatggcatgcatttatatcacgttttggatacgaccttgaccttc aagagtccatggataactgggctttccttacacttgttctattctacgttctatttttagctattttcagtctgattgtt accattacatgcgataatgtaaatttccagtatgtaccgctctttgcggaaataaatgagaagaagacatcgaccctttg a |
Protein
Protein ID | pfu_aug1.0_1002.1_51157.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1002.1_51157.t1 MERHADAKISNSIESSIDGVKIAAQRFRRCRRRSCHDKVNTIAAHNLAKPYKKQVLMVLYQVCVIRADRATEMTFIVSEN EQNLKDMIDETVKEAIESTGTCDITGKSKCTKQKSSIFKQYFHCDFDPDDFSKIEITLHLTDLNLSEYWNPLLIIQNLVD HTKRKKWQELSFNSRGHAFIVECRRIKGHFSETLELAEFPFDHQSLNVVVTSELSQEKLQIVEDDEDISSINVSCFVDEQ EWSLFDLVECISTVTTKQFSPKRNIRFPCLQLGCYAARRSGFFVWNVILIMAFISTSCFTTFAVKPSLPQNRLQLSITLM LTTKVFKLIVINNLPKISYNTRLDRYILFCIVFNFIVTVWHAFISRFGYDLDLQESMDNWAFLTLVLFYVLFLAIFSLIV TITCDNVNFQYVPLFAEINEKKTSTL |