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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1002.1_51157
Locus scaffold1002.1 : 10562 ... 26435 : -
To GenomeBrowser scaffold1002.1:10562..26435
Genes list of scaffold scaffold1002.1
Synonym pfu_aug2.0_1237.1_24796

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1002.1_51157.t1 3 1 Neur_chan_memb 31 51 4.5e-07 29.9 0.23 1100.0 -0.8
pfu_aug1.0_1002.1_51157.t1 3 2 Neur_chan_memb 312 364 4.5e-07 29.9 9.1e-11 4.5e-07 29.9
pfu_aug1.0_1002.1_51157.t1 3 3 Neur_chan_memb 385 409 4.5e-07 29.9 0.45 2200.0 -1.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1002.1_51157.t1 gi|256075014|ref|XP_002573816.1| 0.0

Transcript
Transcript IDpfu_aug1.0_1002.1_51157.t1
Definition-
>pfu_aug1.0_1002.1_51157.t1
atggaaagacatgcggatgcaaagatttcaaacagcattgaatcttccattgatggcgtaaagattgcggctcaacggtt
tcggagatgtagaagaagatcctgccatgacaaggtcaataccatagctgcacataatttagcgaaaccttataagaagc
aagtactcatggtgctataccaagtttgtgttattcgtgctgatcgagcaacagaaatgaccttcattgtatctgaaaat
gaacaaaatcttaaagacatgattgatgaaactgtcaaggaagctattgaaagtactggcacatgcgatataactggcaa
atcgaaatgtacgaaacaaaaatcttcaattttcaaacaatattttcattgtgactttgatcctgatgacttttcaaaaa
tagaaattacattgcatctcacagacctgaacttgagtgaatactggaacccgctgctcatcattcagaaccttgttgac
catacaaaacgtaagaaatggcaggagctcagctttaactcacggggccacgccttcatcgtagagtgtcggagaatcaa
aggacatttctcagagacgctggaactagcagagtttccttttgatcatcagagtttgaacgttgtggtgacatcagagc
tctcacaagagaagttacagatagttgaagatgatgaagacattagtagtattaacgtgtcttgtttcgtggacgagcaa
gagtggtctctctttgatctggttgagtgcatttcaactgtcacaacaaaacagttctcacctaagcggaacattcggtt
tccatgcctacaattaggttgctatgcagcgcgacgatccggtttcttcgtatggaatgttatattaataatggcattta
taagtactagttgttttactacatttgccgtcaagccatcactacctcagaaccgcctccagctgtcaatcaccctgatg
ctaaccacaaaagttttcaaactgattgtcataaacaacctgccaaaaatatcttacaacacgcgattggaccggtatat
cttattctgcattgtattcaacttcatagtgacagtatggcatgcatttatatcacgttttggatacgaccttgaccttc
aagagtccatggataactgggctttccttacacttgttctattctacgttctatttttagctattttcagtctgattgtt
accattacatgcgataatgtaaatttccagtatgtaccgctctttgcggaaataaatgagaagaagacatcgaccctttg
a

Protein
Protein IDpfu_aug1.0_1002.1_51157.t1
Definition-
>pfu_aug1.0_1002.1_51157.t1
MERHADAKISNSIESSIDGVKIAAQRFRRCRRRSCHDKVNTIAAHNLAKPYKKQVLMVLYQVCVIRADRATEMTFIVSEN
EQNLKDMIDETVKEAIESTGTCDITGKSKCTKQKSSIFKQYFHCDFDPDDFSKIEITLHLTDLNLSEYWNPLLIIQNLVD
HTKRKKWQELSFNSRGHAFIVECRRIKGHFSETLELAEFPFDHQSLNVVVTSELSQEKLQIVEDDEDISSINVSCFVDEQ
EWSLFDLVECISTVTTKQFSPKRNIRFPCLQLGCYAARRSGFFVWNVILIMAFISTSCFTTFAVKPSLPQNRLQLSITLM
LTTKVFKLIVINNLPKISYNTRLDRYILFCIVFNFIVTVWHAFISRFGYDLDLQESMDNWAFLTLVLFYVLFLAIFSLIV
TITCDNVNFQYVPLFAEINEKKTSTL

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