Gene
| Gene Model ID | pfu_aug1.0_1003.1_58344 |
|---|---|
| Locus | scaffold1003.1 : 25456 ... 47711 : + |
| To GenomeBrowser | scaffold1003.1:25456..47711 |
| Genes list of scaffold | scaffold1003.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1003.1_58344.t1 | 1 | 1 | AIG1 | 164 | 336 | 0.0 | 173.7 | 0.0 | 0.0 | 172.9 |
| pfu_aug1.0_1003.1_58344.t1 | 1 | 1 | MMR_HSR1 | 165 | 269 | 1.4e-08 | 34.6 | 2.3e-11 | 2.6e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1003.1_58344.t1 | gi|348518245|ref|XP_003446642.1| | PREDICTED: GTPase IMAP family member 8-like, partial [Oreochromis niloticus] | 4.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_1003.1_58344.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1003.1_58344.t1 atgatcgacttttcagatcatatttgcaaaccaacaatgatgacagagatgtacaatgtacaacaaattccttcccttga gttggataattatctcagcaaatgtatcacttctgtacgacagaaaaatggagccgaataccaacctagctacatgaaag aacagaatgcatgggaatgtgcaatttgtacctatctgaacgagaaattgacatcgagattttgtgaagcatgtcaattt gaacggtttacaccagagttttcaaacagagaaaatgaacttcatatgaaagaagagagtgtttgggaatgttcaaaatg tacatacctgaacagggacttaacagtgacattttgcgaggcatgtgactatgagcgggtgaattatggaaaagacatac ctgttcaccataatgaaaaagatatccgaatgcttcgtatggatgcagatgccggagtaccaagacaaagtcatgatggt aacgaaatacgtatgattctgataggaaaaactggagctggtaaaagtgcaactggtaacaccattctaggaaagaaagt tttcatatcagtaccttcaggaaaatcccaaaccaaagtttgtcagcgagaagaagcggtgcggtatggtgagaggatta ccatagttgacacacctggactgtttgacacagcaatatcaaatgaggagtcgattcaagaaatagtaaggagtatctgg atggtacatccgggtccgcatgtcgtacttctcgtcattgagatcgggagatacacagaggagattcaaaatgttgtcaa tcaattcatcagtcatttgggagaaaacgtgctaaaccacatgatggtgatttttactagaaacgacgatctcaaacgtg atgaacaagatatttccgatttcatttctgattcggacgaagtgctgaaagatatgttgcttagaatagataatagatac atagcttttgataatgtttcaggcgaagaaaccgatcaagtggaacttttatttgtcgcatgctcatcaaccaatgaaat acggacaaccatcttcaagaagagcacttccgttgacacctgcccttcttctcaagtgcctatagaattcagttcgtctg aagaggacatcataggctgcgtgttaaagtgtatccaatatatcttatgtcatagcgcgttctattcatcttctctgaaa acttgcaaaggctatagtttcccgaacttgcagagtgccacattcgtatcaaattcggacactgttaattatgaagaaga cgtagggagagcttcttatgaaattcggacctacacgtgcaaaagagcgtataactttaggattttcacaccctctattt tatggcgatataataaacaaaataagaaggatcaagggtacagaatatccatcgaaattgcgtcggaaccataa |
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Protein
| Protein ID | pfu_aug1.0_1003.1_58344.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1003.1_58344.t1 MIDFSDHICKPTMMTEMYNVQQIPSLELDNYLSKCITSVRQKNGAEYQPSYMKEQNAWECAICTYLNEKLTSRFCEACQF ERFTPEFSNRENELHMKEESVWECSKCTYLNRDLTVTFCEACDYERVNYGKDIPVHHNEKDIRMLRMDADAGVPRQSHDG NEIRMILIGKTGAGKSATGNTILGKKVFISVPSGKSQTKVCQREEAVRYGERITIVDTPGLFDTAISNEESIQEIVRSIW MVHPGPHVVLLVIEIGRYTEEIQNVVNQFISHLGENVLNHMMVIFTRNDDLKRDEQDISDFISDSDEVLKDMLLRIDNRY IAFDNVSGEETDQVELLFVACSSTNEIRTTIFKKSTSVDTCPSSQVPIEFSSSEEDIIGCVLKCIQYILCHSAFYSSSLK TCKGYSFPNLQSATFVSNSDTVNYEEDVGRASYEIRTYTCKRAYNFRIFTPSILWRYNKQNKKDQGYRISIEIASEP |
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