Gene
| Gene Model ID | pfu_aug1.0_10038.1_53467 |
|---|---|
| Locus | scaffold10038.1 : 546 ... 8548 : + |
| To GenomeBrowser | scaffold10038.1:546..8548 |
| Genes list of scaffold | scaffold10038.1 |
| Synonym | pfu_aug2.0_565.1_17581 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10038.1_53467.t1 | 1 | 1 | NDUF_B7 | 43 | 102 | 3.8e-19 | 67.8 | 7.1e-23 | 5.3e-19 | 67.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10038.1_53467.t1 | gi|213512214|ref|NP_001134407.1| | NADH dehydrogenase 1 beta subcomplex subunit 7 [Salmo salar] | 2.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10038.1_53467.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10038.1_53467.t1 atgtccaaaagtttttatcagataatgcatccagaggctcgtgtagatgatttcagtccagaaaaattcgatcctaactt gggtttcaaaggagaaaggaaaatgcgagagccccccgttagtgctgacattctgaacaacactcagataccctacagat acagagactattgtgtaggccactacatagagatgaagaagtgtttggcagataacataccatttatcaatcgttgtagt gacctacgacatgaatattcattgtgtcaatacgaagatcaggtaaaaaggatgaaagaatacgaaagagaaaagaggat acttctcaggaacagtagaaaagagacaccagtaaatgaagacttaagtgatatggaatga |
|
Protein
| Protein ID | pfu_aug1.0_10038.1_53467.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10038.1_53467.t1 MSKSFYQIMHPEARVDDFSPEKFDPNLGFKGERKMREPPVSADILNNTQIPYRYRDYCVGHYIEMKKCLADNIPFINRCS DLRHEYSLCQYEDQVKRMKEYEREKRILLRNSRKETPVNEDLSDME |
|