Gene
| Gene Model ID | pfu_aug1.0_1004.1_15306 |
|---|---|
| Locus | scaffold1004.1 : 16596 ... 19813 : + |
| To GenomeBrowser | scaffold1004.1:16596..19813 |
| Genes list of scaffold | scaffold1004.1 |
| Synonym | pfu_aug2.0_1755.1_18511 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1004.1_15306.t1 | 1 | 1 | zf-RING_5 | 23 | 67 | 8.3e-06 | 25.4 | 8.3e-09 | 1.8e-05 | 24.3 |
| pfu_aug1.0_1004.1_15306.t1 | 1 | 1 | zf-C3HC4 | 24 | 66 | 7.6e-08 | 31.8 | 8.0e-11 | 1.7e-07 | 30.7 |
| pfu_aug1.0_1004.1_15306.t1 | 1 | 1 | zf-C3HC4_2 | 24 | 66 | 5.5e-06 | 26.2 | 5.3e-09 | 1.1e-05 | 25.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1004.1_15306.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1004.1_15306.t1 atgttggaacacgaggaatctgaccggaatcttgaaaagataccacttccgctctcgcagaatctgagttgcaaactttg cctgggactgtaccgtgagcccaaactgttgacgtgtttacacagcttctgtagagcatgtttacagacttattgcgaag acagggggatagaggatgaattagagtgtcctacatgtaatgaagtgacaattctacctaaggacggattagacgggctg gttgacaatgatatagtcgtgcagcggatacagagaaatatcgacctgttcaatatctgtattaatctaggtgaagaata tgacggaccccctgatgcaaacgatgaaggggatatgtcaagagacgaaagtggagaggaccctaaaacgtcgaatcgtc tgcagtccataggtgccacaacggtaccgaagtcatatgcatttcaccaacaacaagttctatccaggaggcgcttgcag aaaatgttatctagccttcaaaatgaggccatcaatattgtttatgcgatagatgtcttgaacgatgaaaaacagaacac tgcaaaaatgaaggccaaaaagaaagagatgattcaaattaggtccaggaatatcatagactctgttcgtaggcgtgaaa gaaaattgcttagcgaacttgagaagtcggactgcgataaaatctttttggacgaaattgcttctgcaaaaacttgctta caaggtaatatgagaaagttgctgtccgttgtcgattttgtccgacttctaatagactctggcaacgatattgaggtcgg aaactactttggcctcatttcaaatagagtagattctttggcaaaagcgaaaatgacgctgagcaaaagttctatggact tcaacactcctaccgggaatttggatgacagcattgcagatttattcggaagcttttcattcaagaatgaagaaatccaa atctgggaaatgccgtccgaaattacacacaatgccttagaagagaaaatagacgaagaaaacgactccggacaaccaat caacggtgacgaaaatggtgacgtcacgaggagatacagtatgacagataatgtacccgaactgcccaaaagtacaatta taaaagtcccgagaagggtaagcatcgcagagtgcagtcctctgaccttgaagaagagacccatcagggtcagtcattcc tttgatatcaattttcgagcaggggagggagaaatgatgtcgaccacgcccattgaaactgacatctccacgaatcagtt acagatcgatagtgatgaaactcatatgtcacctgatgaatctaatccaatcaagtatcgatggcgcaagatgaaccggc gccacaccgtggacgatatacaaaaagaaatacaaatcaatgacgaaaaatgggacacgttgttcccagccacgccgacc gatagatccagaacgagggtgcgtcacatgagtgaagatttgcatagaacgcgccaaatgatcaacatttgtaaacggca aatcgcagagtcgaagactcgtgtgataccggaagtcagtaattacggaagcggaagtgagtttgaaaatgaacnttctc attggaaagtttag |
|
Protein
| Protein ID | pfu_aug1.0_1004.1_15306.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1004.1_15306.t1 MLEHEESDRNLEKIPLPLSQNLSCKLCLGLYREPKLLTCLHSFCRACLQTYCEDRGIEDELECPTCNEVTILPKDGLDGL VDNDIVVQRIQRNIDLFNICINLGEEYDGPPDANDEGDMSRDESGEDPKTSNRLQSIGATTVPKSYAFHQQQVLSRRRLQ KMLSSLQNEAINIVYAIDVLNDEKQNTAKMKAKKKEMIQIRSRNIIDSVRRRERKLLSELEKSDCDKIFLDEIASAKTCL QGNMRKLLSVVDFVRLLIDSGNDIEVGNYFGLISNRVDSLAKAKMTLSKSSMDFNTPTGNLDDSIADLFGSFSFKNEEIQ IWEMPSEITHNALEEKIDEENDSGQPINGDENGDVTRRYSMTDNVPELPKSTIIKVPRRVSIAECSPLTLKKRPIRVSHS FDINFRAGEGEMMSTTPIETDISTNQLQIDSDETHMSPDESNPIKYRWRKMNRRHTVDDIQKEIQINDEKWDTLFPATPT DRSRTRVRHMSEDLHRTRQMINICKRQIAESKTRVIPEVSNYGSGSEFENEXSHWKV |
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