Gene
| Gene Model ID | pfu_aug1.0_1004.1_15307 |
|---|---|
| Locus | scaffold1004.1 : 25197 ... 47585 : - |
| To GenomeBrowser | scaffold1004.1:25197..47585 |
| Genes list of scaffold | scaffold1004.1 |
| Synonym | pfu_aug2.0_1298.1_28193 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1004.1_15307.t1 | 1 | 1 | TatD_DNase | 1376 | 1578 | 2.3e-23 | 82.6 | 1.4e-26 | 4.0e-23 | 81.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1004.1_15307.t1 | gi|156378067|ref|XP_001630966.1| | predicted protein [Nematostella vectensis] | 5.0e-32 |
Transcript
| Transcript ID | pfu_aug1.0_1004.1_15307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1004.1_15307.t1 atgacgatgatgtacgcttctatcggggacggttatgaaaaatcaaatgaaggagcacaagatggcagctctacctctca gtccattgtcgatcaactacaaaacatcgtaggaatgaaatgccgagctccgttccttcatgagtggggttctaagggtt acttcaatgccattgtaacgggggtagaggaaacgcagagttcagacgaagttcctaaagtcactgttatgtattgtaat ccgacctccacaaagatgctgccttgttcctttcatctagaggggagatgtaactttgacagagaatggtgtaaatactc gcacggaaatgtggtggacgtggaggatttgaaggaatttaaagaaccaaattataactatcttcagatgggtatgccat gtttagtacggtatgatgatgacctatggtacagggctaaagtagtggatatcctggaagatcataagtttaccgtcaat tttgacaattataacgacaccaggactgtggacttggaagagattctgcctctcgatgcctcaaacaacgaatcagatga gaatagtgatgatgatgatgatgctgacagaaatcagccaatcaacagaggccctgaagaagagggggaggagcttcctg tgtatctatggaaaccacctaaaactaatgaagctcttggaagctgggaggctcatacaaggaattataacacatcttcg cacattatcaaaaggaatcatcagaatttggtttacctgagacaccccagttttatggaaatccacatggatcagcatct gcacaaaatacagnggggaatgccatcttcacatttacactttgatgcttcaagtcgtccttctgttgcccatcaccaaa atgtgaaaatacccgattttacacaagatgaccacatgatgcagacaagtacattcgctattggcaatcaaatagggaga agacaagcattgttacctacaccagatattactgttgccagtggtaccaatgataccaagagccaaaatcctaatcctca atcagctagagctgcatctcaattaggaagaattgcatatcatgcttctaatgatggaaacagtgccacttattcgaaag atcagtatctccatggagcaccttccgtgttacctactccaaaattgaatgttaccgatggattcagtaatcctaagagt caaaattctagtcctcacttagctaaaactacatctcatgcttctaataacagtgccaataattcaaaagatcagtatcg ctatggtcaacccactgtgttacctactccaaaaatgaatgtttctgatgtcagcagtaatcctaagagtcaaaatccaa gtcctcactcagctagaactacatctaatgcttctaataatggggaaaatgccactaattcaaaggatcagtatcgctat tctgcacctactgcacttccagagtcagctagagtatggataaatcctaatttacagaagcagacaccaaaacctgcatc aatacatgaaagcatttggaaaaaatacagcagaaagaggaaacctggaccttttgacgtgactaaccctttgaaaagaa aaattcctgaatcaggccaaggtaatgatacatcagatactcagaactctgaaaagtcctttgaagaaaaccctgatgca gatgcacaggatgcatcagtgccaaagaaaaagagacgcagacctaaaaacccatacagccgaggtctgcattcaaaatg gactccaaaaacggcaagtaagttccagagttgtccttttccgacttgcaacattcagagcaggagaatgaaatggcatg ttggaattgaacacttgaatccagcctttgacaggattgatgcgtatcaaaatccacgccatcatattgctcgcagagat gggttggagtggcttgctaagaaaatcttgggtcccaaagctagcattaacgatcttgttcctcttttgaaccggtctaa catcatacataacaatagtgtgctgtctgataaggatatcgcaaacatggagtccatgtgcagggcaatgaattgggaga gaccacctgcgtttacactacatcccatcaactcccccagcgtactcttgttctggcgctgtctgctcaatctggccatg atgttaaaaccagaggatcatcagctgttcatgaaagaaactacgacaaacctgcttaaatggtactattcagaaaattc aactgcagaagcaaaagatgtggttaacagaccagtatctgtagagcagaaagcaagcacaacatcgtcacaaccaaact ttgctttattaggaagaaatgatataaactcaagactggaaaatataaggaagctaattgctcagcatgctgatgttgat aaggtgcagatacctaactttaaaagtattggagctgtaggtcagcagaaatcacctgacattaagagcagtactacatt aggacccaggaaggcatccgactttcatagtccagcaaattcaggtaaccagacattgcctgatgttaacagaagtgtac ctgtaggttaccaaaggacacccaattttcagagtgttgcaagttcaggtaacgatacgatgcatggtaataagagtaat ttagcatcagatagcccaaagacacccagtattcaaagtattacaacctcgggtaaacatacattgcttgacattcagag aaatgaagctgtaggtagacaaagggcccccaactttcagagtgttgcaagtcaaggtaacaaaaggatgacagacgtta gaaggaatgttgctgtaagtaaccaaatgacaactgattttcagagggttcccagcttagataaacaaagagcatcagac tttcagagtattgcagcatcaggaaaccgaaaagcaactgaccctaacactattgcagccttcagtaataaccaagggac acctgactttcagtgtatgtcagcttcaggtatcaaaaagacaccagactctacaagttcagatgcttttaggagcaacc agcatacacatgactccatgcattttacagccttctgtagcaaccagcagatccctgattccagaagttttgtagccttc agtagcaaccagcagatccctgattccatgagtgttgcagcatttggtagcaaccaggagacacctgactttcagagtat tgcagccttaggtgacaaaatgtcaccaagctccgcgagttctgcagccttcagtgacaaccaacatagtcctgattcca tgaattttaccgcctttggtagcatccagcagagtcctgactctcagaatattcaacttttcagcaaccagccgacaact gatgctaagaatattcaacagttcagtaggcatgaacaggcgtatgcctttatgagaagagtccaagcccttaacagaaa ccagagggcaccaggcccaaagaagaatgctgctcaaaatagcaaccagcagatgcaagaatttaagaaagatggatcct tgtatagcaaccagtcgccaccagaatttaagaggatggaaccattaattagtctgcaacaatcaccagacttgatgagg actccagcattgagaggaaatccggagatacctacatttgagagaattgcagcatcaaacagtacccaacagtcacatga cttgaaaggggttgcagtctcaagcaaccaacagacatctgactttaaaagtacagccgcccaaagtaaccaaaacagtg aagtgtccagtactcaagggcctccagaagaaatgatgtcttctttgggtggatggagagatggtagtgacagaaagaat acagcaagtgggcatcagaaagcagccgtcgcatctatgtcaagtattcttctagaaaatgtggactgtgtgtttgactc atatttaaatgttgaggaaatgtgtcagatattgttcaagaggaaaagttggtcatttgggagacaacctttgaagacaa tttttaaaactaggataatgagagaggttgaaccaaaacatacagtggctgtagtaggaggagtaatgatctttgatgac ccgagttcctatccgaaaaagtctcacgttgaccctacgtggaatgtggcgtttggcgtacatccaagacatgctccatt tcttacggaggagcagttaagtagactcgccaaaattttgcaagggagagaggttcgggcactgggaacgataggattcg actatactgagcagaagacgtactgggatttccaagaggaggttttcgttaatcttctaggacttagtgaacctgacaga ccaataataattcatgtaaaaggcgtggaaggtgatgtgcttggatccagtgttcatcagaaatgcttcactaaagtgaa agaaaaatgttcaaaggaacagaaaattcaattgcattcatattctggaactgccgaagatgtcggaatttggacgacag aatttcctaattgctactttggtttcacgtggaatgttgaactctttaacgagattcagaagagtgctatcaggagtgtg ccacgtgacaaaatcttgatcgagactggaattttggaccggtctgcctcattaccgaggactgcgatcaagagacccac tcaacttggtgatctcgctgctttgattgctgagataaggggagaaaagttcgatgaattcttgaagcaaaccgtagaaa atggacaacgcctacacgggacgagaatagtcaagaaaaaatcacgatga |
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Protein
| Protein ID | pfu_aug1.0_1004.1_15307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1004.1_15307.t1 MTMMYASIGDGYEKSNEGAQDGSSTSQSIVDQLQNIVGMKCRAPFLHEWGSKGYFNAIVTGVEETQSSDEVPKVTVMYCN PTSTKMLPCSFHLEGRCNFDREWCKYSHGNVVDVEDLKEFKEPNYNYLQMGMPCLVRYDDDLWYRAKVVDILEDHKFTVN FDNYNDTRTVDLEEILPLDASNNESDENSDDDDDADRNQPINRGPEEEGEELPVYLWKPPKTNEALGSWEAHTRNYNTSS HIIKRNHQNLVYLRHPSFMEIHMDQHLHKIQXGMPSSHLHFDASSRPSVAHHQNVKIPDFTQDDHMMQTSTFAIGNQIGR RQALLPTPDITVASGTNDTKSQNPNPQSARAASQLGRIAYHASNDGNSATYSKDQYLHGAPSVLPTPKLNVTDGFSNPKS QNSSPHLAKTTSHASNNSANNSKDQYRYGQPTVLPTPKMNVSDVSSNPKSQNPSPHSARTTSNASNNGENATNSKDQYRY SAPTALPESARVWINPNLQKQTPKPASIHESIWKKYSRKRKPGPFDVTNPLKRKIPESGQGNDTSDTQNSEKSFEENPDA DAQDASVPKKKRRRPKNPYSRGLHSKWTPKTASKFQSCPFPTCNIQSRRMKWHVGIEHLNPAFDRIDAYQNPRHHIARRD GLEWLAKKILGPKASINDLVPLLNRSNIIHNNSVLSDKDIANMESMCRAMNWERPPAFTLHPINSPSVLLFWRCLLNLAM MLKPEDHQLFMKETTTNLLKWYYSENSTAEAKDVVNRPVSVEQKASTTSSQPNFALLGRNDINSRLENIRKLIAQHADVD KVQIPNFKSIGAVGQQKSPDIKSSTTLGPRKASDFHSPANSGNQTLPDVNRSVPVGYQRTPNFQSVASSGNDTMHGNKSN LASDSPKTPSIQSITTSGKHTLLDIQRNEAVGRQRAPNFQSVASQGNKRMTDVRRNVAVSNQMTTDFQRVPSLDKQRASD FQSIAASGNRKATDPNTIAAFSNNQGTPDFQCMSASGIKKTPDSTSSDAFRSNQHTHDSMHFTAFCSNQQIPDSRSFVAF SSNQQIPDSMSVAAFGSNQETPDFQSIAALGDKMSPSSASSAAFSDNQHSPDSMNFTAFGSIQQSPDSQNIQLFSNQPTT DAKNIQQFSRHEQAYAFMRRVQALNRNQRAPGPKKNAAQNSNQQMQEFKKDGSLYSNQSPPEFKRMEPLISLQQSPDLMR TPALRGNPEIPTFERIAASNSTQQSHDLKGVAVSSNQQTSDFKSTAAQSNQNSEVSSTQGPPEEMMSSLGGWRDGSDRKN TASGHQKAAVASMSSILLENVDCVFDSYLNVEEMCQILFKRKSWSFGRQPLKTIFKTRIMREVEPKHTVAVVGGVMIFDD PSSYPKKSHVDPTWNVAFGVHPRHAPFLTEEQLSRLAKILQGREVRALGTIGFDYTEQKTYWDFQEEVFVNLLGLSEPDR PIIIHVKGVEGDVLGSSVHQKCFTKVKEKCSKEQKIQLHSYSGTAEDVGIWTTEFPNCYFGFTWNVELFNEIQKSAIRSV PRDKILIETGILDRSASLPRTAIKRPTQLGDLAALIAEIRGEKFDEFLKQTVENGQRLHGTRIVKKKSR |
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