Gene
| Gene Model ID | pfu_aug1.0_1004.1_15308 |
|---|---|
| Locus | scaffold1004.1 : 48816 ... 59033 : + |
| To GenomeBrowser | scaffold1004.1:48816..59033 |
| Genes list of scaffold | scaffold1004.1 |
| Synonym | pfu_aug2.0_1755.1_18509 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1004.1_15308.t1 | 1 | 1 | PhyH | 23 | 249 | 2.8e-16 | 60.2 | 1.4e-19 | 4.3e-16 | 59.5 |
| pfu_aug1.0_1004.1_15308.t1 | 1 | 1 | Tetraspannin | 308 | 491 | 1.3e-25 | 90.0 | 6.9e-29 | 2.0e-25 | 89.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| 8-16cell | 4 |
| >Adult tissues | |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_1004.1_15308.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1004.1_15308.t1 atgaaagcttatagactcggtaatttacgaaagatgacatattttgattattatatatatacattccagggttacatctt gattgaaaacttctttgacgttgagaaagaattgaacccagtccgtgaagacatcaaccaactcgtggacgaactggcac aaaaactctacaaagctggcaaacttaaaaaactatacaaagagtacggactatttgaacgcctcacaaagatagaagca gagttccctggatccaacatcctactacataaaacaggaaaactcccaccgtcttttcgaaagctttggaccaatgaacg tttactgaatcttatggaacagctgattggaccggaagttgctatcagtccagtttggaatctccgcacaaaaactccca aaaatactgcaacagttgtgccctggcatcaagataatggttacttcgatttggattcctacaataccctaatcccaaca gcctggatccccttactcgataccaatgaattcaatggcgggatggagatgtgtaagaatgcacacctgaagggtaaggt ggccaaacaccaatgttgttggggtgactcctggtatgtcatgatggaagaggaagaaatggtcaacacactaggggtag atatgaagaaagatacagaagtctgtccagtagcgtatggagggatgcttttatttaacaacttgactcctcatagaagt ttaccaaacgtgtcaaatcaagtacgttggagtttggacctccgctggcagagtccggaccatccctatggtctatttgg actgaaggacggaatgttggtccgctctgccaagaacccggatattaaagctgattggaacaaattcgaatcggtggacc gaacaacggtacagcaaaaatctgtggagggagtggtgaagatgttcggaggaggtttactggggataggtatctttatc ctggtcagtaagaacgacattttggtattgaccaggagcgtagatacctccaatctagatgtcccctccctcatagagaa agccgcctatgctatcatagcgggaggggctttcatattcatcgtggccttccttggatgctgcggggcttgtagaaaga gcaaaggaatgctgtgtacatatgctatcgtcgttggattaattctagcattggaaatagcagcagttgtcatggcaatc gtttataagagtgacttcgagaaatttgcaaaggacaacctgacaaacttgttggagaccagatacattggtccttacga tttctctgacgtcatcagtctggcctttgacctggtccacattttgtttggttgctgcggggtaacttccggtgcacaat tcgccaatatttcaagctggaatacgacatatgcgtacgacgacggaagcggaagttacgtcgtcgccactgcggttata ccagcgacttgttgtgacttttcaaacgatgatgcttttccaaatgacatcaccaattttctgctgtccatgacaaatac gacatgtcctgtgacaaaagccaactcttattatgaaaaagtaagactttacatatccttgtag |
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Protein
| Protein ID | pfu_aug1.0_1004.1_15308.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1004.1_15308.t1 MKAYRLGNLRKMTYFDYYIYTFQGYILIENFFDVEKELNPVREDINQLVDELAQKLYKAGKLKKLYKEYGLFERLTKIEA EFPGSNILLHKTGKLPPSFRKLWTNERLLNLMEQLIGPEVAISPVWNLRTKTPKNTATVVPWHQDNGYFDLDSYNTLIPT AWIPLLDTNEFNGGMEMCKNAHLKGKVAKHQCCWGDSWYVMMEEEEMVNTLGVDMKKDTEVCPVAYGGMLLFNNLTPHRS LPNVSNQVRWSLDLRWQSPDHPYGLFGLKDGMLVRSAKNPDIKADWNKFESVDRTTVQQKSVEGVVKMFGGGLLGIGIFI LVSKNDILVLTRSVDTSNLDVPSLIEKAAYAIIAGGAFIFIVAFLGCCGACRKSKGMLCTYAIVVGLILALEIAAVVMAI VYKSDFEKFAKDNLTNLLETRYIGPYDFSDVISLAFDLVHILFGCCGVTSGAQFANISSWNTTYAYDDGSGSYVVATAVI PATCCDFSNDDAFPNDITNFLLSMTNTTCPVTKANSYYEKVRLYISL |
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