Gene
| Gene Model ID | pfu_aug1.0_10043.1_68136 |
|---|---|
| Locus | scaffold10043.1 : 25376 ... 28715 : + |
| To GenomeBrowser | scaffold10043.1:25376..28715 |
| Genes list of scaffold | scaffold10043.1 |
| Synonym | pfu_aug2.0_40.1_00116 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10043.1_68136.t2 | 1 | 1 | Glyco_hydro_38 | 1 | 225 | 0.0 | 171.6 | 0.0 | 0.0 | 171.2 |
| pfu_aug1.0_10043.1_68136.t2 | 1 | 1 | Alpha-mann_mid | 231 | 306 | 5.0e-22 | 77.8 | 2.2e-25 | 1.1e-21 | 76.8 |
| pfu_aug1.0_10043.1_68136.t2 | 1 | 1 | Glyco_hydro_38C | 357 | 439 | 1.2e-07 | 30.9 | 3.3e-11 | 1.6e-07 | 30.4 |
Transcript
| Transcript ID | pfu_aug1.0_10043.1_68136.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10043.1_68136.t1 atggacgatgaagcatctacacattataatgccataattgacgaacataccctaggctttgaattcctacgggacaattt tggagaatgtggtagacctagagtagcttggcaaatagatccgtttggtcacagtagggagcatgcctctctgtttgcta gaatgggatttgatgggttgttctttggaagactagattatcaggataaagaagaaagaatgaaaacaaagacgatggag atgatttggcaaggaagccccaaaaatctgggaagtcagagtgatttatttactggagttctttacaatgggtacggacc accagggggattctgttttgatgtgaaatgtcacgaggatccaatcatggacgaccctaatctccatgatttcaatgttc agcagaaagtgtctagctttatcaatgccaccttaacatgggctgagagctacgctaccgagcatgttctgatgacaatg ggtggagatttcaactacgagaacgcaaacatgtggtacaaaaatttagataaattgatgtataacattaaccgagaaca cgcgcaaggaggaaacatcaacctattatactcgacaccttcttgctatctgaatcaagtgaataaagctaatcttacat ggccatctaagcaggatgatttcttcccgtatgcatcttcaccccatactttctggtcaggatactttacaagcagacca gcactgaagcattatgtccgacaaagtaataatttcttacaggcttgtaaacacttgaatgcatttgcatctctatttgg accaacaaacagcaatggaattcgggtactgaaagaagcgatgggcgttgcgcagcatcatgacgcagtttccggtacag agaaacaagctgttgcagacgattacgcgttaagactatacaaaggagtaaatgcttgtcagagtgttttagaaaatgca tacaaaaccttgttacaaacagacaaaaatgtcaatttcccggaacaatcattctgtgatctactgaacatcagtaggtg caatcttacagaagggaacgaacaattcactgtcaatgtctacaatcctttggctcgggaagtatctcattggattaaat tacctactaatgcaaaatcttgtgttgtaaccgacccttttggtaaacaaattgtttcgcagatagtaccaattacaaac gagacaaagagaatcccagagagaaatggttctatcgctgaaaatagtataattttcatggccacggttccacctctgag tagtagtatttacttcgtagaaacaaacaaaggactcgaccaagacacaaagcccctaagtttttaa |
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| Transcript ID | pfu_aug1.0_10043.1_68136.t2 |
| Definition | - |
>pfu_aug1.0_10043.1_68136.t2 atggacgatgaagcatctacacattataatgccataattgacgaacataccctaggctttgaattcctacgggacaattt tggagaatgtggtagacctagagtagcttggcaaatagatccgtttggtcacagtagggagcatgcctctctgtttgcta gaatgggatttgatgggttgttctttggaagactagattatcaggataaagaagaaagaatgaaaacaaagacgatggag atgatttggcaaggaagccccaaaaatctgggaagtcagagtgatttatttactggagttctttacaatgggtacggacc accagggggattctgttttgatgtgaaatgtcacgaggatccaatcatggacgaccctaatctccatgatttcaatgttc agcagaaagtgtctagctttatcaatgccaccttaacatgggctgagagctacgctaccgagcatgttctgatgacaatg ggtggagatttcaactacgagaacgcaaacatgtggtacaaaaatttagataaattgatgtataacattaaccgagaaca cgcgcaaggaggaaacatcaacctattatactcgacaccttcttgctatctgaatcaagtgaataaagctaatcttacat ggccatctaagcaggatgatttcttcccgtatgcatcttcaccccatactttctggtcaggatactttacaagcagacca gcactgaagcattatgtccgacaaagtaataatttcttacaggcttgtaaacacttgaatgcatttgcatctctatttgg accaacaaacagcaatggaattcgggtactgaaagaagcgatgggcgttgcgcagcatcatgacgcagtttccggtacag agaaacaagctgttgcagacgattacgcgttaagactatacaaaggagtaaatgcttgtcagagtgttttagaaaatgca tacaaaaccttgttacaaacagacaaaaatgtcaatttcccggaacaatcattctgtgatctactgaacatcagtaggtg caatcttacagaagggaacgaacaattcactgtcaatgtctacaatcctttggctcgggaagtatctcattggattaaat tacctactaatgcaaaatcttgtgttgtaaccgacccttttggtaaacaaattgtttcgcagatagtaccaattacaaac gagacaaagagaatcccagagagaaatggttctatcgctgaaaatagtataattttcatggccacggttccacctctgag tagtagtatttacttcgtagaaacaaacaaaggactcgaccaagacacaaagcccctaagtttttaa |
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Protein
| Protein ID | pfu_aug1.0_10043.1_68136.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10043.1_68136.t1 MDDEASTHYNAIIDEHTLGFEFLRDNFGECGRPRVAWQIDPFGHSREHASLFARMGFDGLFFGRLDYQDKEERMKTKTME MIWQGSPKNLGSQSDLFTGVLYNGYGPPGGFCFDVKCHEDPIMDDPNLHDFNVQQKVSSFINATLTWAESYATEHVLMTM GGDFNYENANMWYKNLDKLMYNINREHAQGGNINLLYSTPSCYLNQVNKANLTWPSKQDDFFPYASSPHTFWSGYFTSRP ALKHYVRQSNNFLQACKHLNAFASLFGPTNSNGIRVLKEAMGVAQHHDAVSGTEKQAVADDYALRLYKGVNACQSVLENA YKTLLQTDKNVNFPEQSFCDLLNISRCNLTEGNEQFTVNVYNPLAREVSHWIKLPTNAKSCVVTDPFGKQIVSQIVPITN ETKRIPERNGSIAENSIIFMATVPPLSSSIYFVETNKGLDQDTKPLSF |
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| Protein ID | pfu_aug1.0_10043.1_68136.t2 |
| Definition | - |
>pfu_aug1.0_10043.1_68136.t2 MDDEASTHYNAIIDEHTLGFEFLRDNFGECGRPRVAWQIDPFGHSREHASLFARMGFDGLFFGRLDYQDKEERMKTKTME MIWQGSPKNLGSQSDLFTGVLYNGYGPPGGFCFDVKCHEDPIMDDPNLHDFNVQQKVSSFINATLTWAESYATEHVLMTM GGDFNYENANMWYKNLDKLMYNINREHAQGGNINLLYSTPSCYLNQVNKANLTWPSKQDDFFPYASSPHTFWSGYFTSRP ALKHYVRQSNNFLQACKHLNAFASLFGPTNSNGIRVLKEAMGVAQHHDAVSGTEKQAVADDYALRLYKGVNACQSVLENA YKTLLQTDKNVNFPEQSFCDLLNISRCNLTEGNEQFTVNVYNPLAREVSHWIKLPTNAKSCVVTDPFGKQIVSQIVPITN ETKRIPERNGSIAENSIIFMATVPPLSSSIYFVETNKGLDQDTKPLSF |
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