Gene
Gene Model ID | pfu_aug1.0_100445.1_49543 |
---|---|
Locus | scaffold100445.1 : 203 ... 1255 : - |
To GenomeBrowser | scaffold100445.1:203..1255 |
Genes list of scaffold | scaffold100445.1 |
Synonym | pfu_aug2.0_2802.1_08985 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | shematrin-4 |
Description | reciprocal BLASTN hit to NCBI Accession AB244422 |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_100445.1_49543.t1 | gi|93102305|dbj|BAE93436.1| | shematrin-4 [Pinctada fucata] | 4.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
mantleEdge | 1 |
Transcript
Transcript ID | pfu_aug1.0_100445.1_49543.t1 |
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Definition | - |
>pfu_aug1.0_100445.1_49543.t1 atgaggtatcttctattagctctttttattggtggcgccctatgtggtggatatgatgatgggtacggcagtcacggaag aaggtatagaggtctaggctcatatggcggatatccttcactgggaggatatggttcatacggaggatatccatcgatag gatatggctcacacggaggatatccatctgttggtggatatggttcatacggaggatatccatcaataggatacggttca tatggaggatatccatcaataggatatggttcatacggaggatatccatctgttggtggatacggttcgtacggaggata tccatctgttggtggatatggcggattaggaggattaggagggtatggaggatatggacggggaggaatctacgatctat tgtgtcgattatatggcaggaatgttggatatggcggatacggaggctatccagtatcatatggaggacttggatcttac ggcggcttcccatcgggttatggaggatatggaagctatccaggatcatatggtggatatccatcaacatatggtggtta tggaaattatggtggctatccatatggcggatatggaagctacggtggtttcccatcactctacgggggttatggaaact ttggcggctatccatcaggtggatatggaggatatggaaacctaggcggctatggaaacctaggcggatatggaggacta ggcggttatggaggatatggaggactaggcggatatggaagactaggcggatatggaggactaggcggctatggaggata tggaggactaggcggatatggaggactaggcggatatggaggatatggaaacctaggaggatacggaaactttggaggat atccatcatacggtggaggatatggaatcagacctattaaggtattttatatcaaataa |
Protein
Protein ID | pfu_aug1.0_100445.1_49543.t1 |
---|---|
Definition | - |
>pfu_aug1.0_100445.1_49543.t1 MRYLLLALFIGGALCGGYDDGYGSHGRRYRGLGSYGGYPSLGGYGSYGGYPSIGYGSHGGYPSVGGYGSYGGYPSIGYGS YGGYPSIGYGSYGGYPSVGGYGSYGGYPSVGGYGGLGGLGGYGGYGRGGIYDLLCRLYGRNVGYGGYGGYPVSYGGLGSY GGFPSGYGGYGSYPGSYGGYPSTYGGYGNYGGYPYGGYGSYGGFPSLYGGYGNFGGYPSGGYGGYGNLGGYGNLGGYGGL GGYGGYGGLGGYGRLGGYGGLGGYGGYGGLGGYGGLGGYGGYGNLGGYGNFGGYPSYGGGYGIRPIKVFYIK |