Gene
| Gene Model ID | pfu_aug1.0_100445.1_49543 |
|---|---|
| Locus | scaffold100445.1 : 203 ... 1255 : - |
| To GenomeBrowser | scaffold100445.1:203..1255 |
| Genes list of scaffold | scaffold100445.1 |
| Synonym | pfu_aug2.0_2802.1_08985 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | shematrin-4 |
| Description | reciprocal BLASTN hit to NCBI Accession AB244422 |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_100445.1_49543.t1 | gi|93102305|dbj|BAE93436.1| | shematrin-4 [Pinctada fucata] | 4.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_100445.1_49543.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_100445.1_49543.t1 atgaggtatcttctattagctctttttattggtggcgccctatgtggtggatatgatgatgggtacggcagtcacggaag aaggtatagaggtctaggctcatatggcggatatccttcactgggaggatatggttcatacggaggatatccatcgatag gatatggctcacacggaggatatccatctgttggtggatatggttcatacggaggatatccatcaataggatacggttca tatggaggatatccatcaataggatatggttcatacggaggatatccatctgttggtggatacggttcgtacggaggata tccatctgttggtggatatggcggattaggaggattaggagggtatggaggatatggacggggaggaatctacgatctat tgtgtcgattatatggcaggaatgttggatatggcggatacggaggctatccagtatcatatggaggacttggatcttac ggcggcttcccatcgggttatggaggatatggaagctatccaggatcatatggtggatatccatcaacatatggtggtta tggaaattatggtggctatccatatggcggatatggaagctacggtggtttcccatcactctacgggggttatggaaact ttggcggctatccatcaggtggatatggaggatatggaaacctaggcggctatggaaacctaggcggatatggaggacta ggcggttatggaggatatggaggactaggcggatatggaagactaggcggatatggaggactaggcggctatggaggata tggaggactaggcggatatggaggactaggcggatatggaggatatggaaacctaggaggatacggaaactttggaggat atccatcatacggtggaggatatggaatcagacctattaaggtattttatatcaaataa |
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Protein
| Protein ID | pfu_aug1.0_100445.1_49543.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_100445.1_49543.t1 MRYLLLALFIGGALCGGYDDGYGSHGRRYRGLGSYGGYPSLGGYGSYGGYPSIGYGSHGGYPSVGGYGSYGGYPSIGYGS YGGYPSIGYGSYGGYPSVGGYGSYGGYPSVGGYGGLGGLGGYGGYGRGGIYDLLCRLYGRNVGYGGYGGYPVSYGGLGSY GGFPSGYGGYGSYPGSYGGYPSTYGGYGNYGGYPYGGYGSYGGFPSLYGGYGNFGGYPSGGYGGYGNLGGYGNLGGYGGL GGYGGYGGLGGYGRLGGYGGLGGYGGYGGLGGYGGLGGYGGYGNLGGYGNFGGYPSYGGGYGIRPIKVFYIK |
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