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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10048.1_53470
Locus scaffold10048.1 : 18176 ... 25106 : +
To GenomeBrowser scaffold10048.1:18176..25106
Genes list of scaffold scaffold10048.1
Synonym pfu_aug2.0_209.1_30427

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10048.1_53470.t1 1 1 DEP 14 84 1.0e-09 37.9 9.1e-14 1.3e-09 37.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10048.1_53470.t1 gi|347963411|ref|XP_310900.5| AGAP000232-PA [Anopheles gambiae str. PEST] 1.0e-15

Transcript
Transcript IDpfu_aug1.0_10048.1_53470.t1
Definition-
>pfu_aug1.0_10048.1_53470.t1
atgattctggaaatgtctaaaagcgaaaatgacaacgggatgatcatgagggccaaacgagggatattttcggattcctt
tcagtcctttactggagcggatttaatagagtggatcaagcgtcggtacagtatccaggacatcagagaggccacctccc
tagcctccatgttatgtctctatggttatatataccctgtggacttcaggtcatatgtggtcaaagatgaccgatctacg
gagtatagattccagaccccgtattattggccatataaaacagatggaacagcagatagtatcaaatatggtttgttgaa
cttcgtctcttgtattggggatattatgccagtcaaatataataagtcagattga

Protein
Protein IDpfu_aug1.0_10048.1_53470.t1
Definition-
>pfu_aug1.0_10048.1_53470.t1
MILEMSKSENDNGMIMRAKRGIFSDSFQSFTGADLIEWIKRRYSIQDIREATSLASMLCLYGYIYPVDFRSYVVKDDRST
EYRFQTPYYWPYKTDGTADSIKYGLLNFVSCIGDIMPVKYNKSD

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