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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10089.1_53474
Locus scaffold10089.1 : 9048 ... 13195 : -
To GenomeBrowser scaffold10089.1:9048..13195
Genes list of scaffold scaffold10089.1
Synonym pfu_aug2.0_2027.1_25264

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10089.1_53474.t1 1 1 Gal-3-0_sulfotr 60 345 4.39994e-41 140.8 8.40779e-45 5.79997e-41 140.4
pfu_aug1.0_10089.1_53474.t1 1 1 Sulfotransfer_2 60 309 1.3e-08 34.8 6.8e-12 5.1e-08 32.9

Transcript
Transcript IDpfu_aug1.0_10089.1_53474.t1
Definition-
>pfu_aug1.0_10089.1_53474.t1
atgatatcagatgtcaacgatatcatcaggtacaagtcatttgtacgtatccctttacctgtaacatcagggcagctgaa
ggacccatctccacttcatgatgttgacgatatactcatggataagtcacttggacgtaacttcttatcggtaacttcag
gacagctgaagagttatacaaaggtgaaaaaaagaactcatctatactttctgaagactcataaatgtggtagcacaact
gtttcaaccttactagggcgatttggctacttgaataacttaacatttatcttaccaaatccaaatgcattttttataac
tttagaaaaagtgaatggatatctaccagaaccagcgggagagcagtttgatattctaatttatcactcaaggtacaata
gaggagttctacagcgaatccttccaaggggcacgaaatacattggtcttataagagaaccattagaacgttttgtatca
gcttttatatttgttagacatgcccacaaagttgatttcgcggttcaaatcccaggagatgataccaatgctgcaatatc
atggtatttaaagaacgcagctctttacactagaaaatccgaccgaaagtatagaatactggacaatttgatggcttttg
atttcggatttcctatcgaagaaaggaaaaatgcaaataatagaatgattgaggcgttcttaaggaggattgacgccgag
tttgatttgatcattgttttagaataccttgatgaatcccttcttctgctcaagaggatgatgttttggtcgctgaaaga
cattatgtacgtcaaaccgctcaatacagccaaaatcaacaaggaagacgttttgaattcactgacggaagatgatcgac
aacgacacaagagactagagtttttagattttgctttatacgattactttatgaaaaaaattcgacaaacaattcgcatc
gaaggtatcccatttcagaaggagcttcaagactacagatcagcgagagctgctgtttcaagattctgtgaaaatcacaa
ggcaggggaggaactacattacacaacgaaatacttcaaagaacacgtcagagtaaattattatgattgctatcttatga
atgtagaaagcagctctctaagggaaatgattcgacggagcaagcaatatcccgaagggccttcgaagaggaagctgtat
aagtga

Protein
Protein IDpfu_aug1.0_10089.1_53474.t1
Definition-
>pfu_aug1.0_10089.1_53474.t1
MISDVNDIIRYKSFVRIPLPVTSGQLKDPSPLHDVDDILMDKSLGRNFLSVTSGQLKSYTKVKKRTHLYFLKTHKCGSTT
VSTLLGRFGYLNNLTFILPNPNAFFITLEKVNGYLPEPAGEQFDILIYHSRYNRGVLQRILPRGTKYIGLIREPLERFVS
AFIFVRHAHKVDFAVQIPGDDTNAAISWYLKNAALYTRKSDRKYRILDNLMAFDFGFPIEERKNANNRMIEAFLRRIDAE
FDLIIVLEYLDESLLLLKRMMFWSLKDIMYVKPLNTAKINKEDVLNSLTEDDRQRHKRLEFLDFALYDYFMKKIRQTIRI
EGIPFQKELQDYRSARAAVSRFCENHKAGEELHYTTKYFKEHVRVNYYDCYLMNVESSSLREMIRRSKQYPEGPSKRKLY
K

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