Gene
| Gene Model ID | pfu_aug1.0_1009.1_00579 |
|---|---|
| Locus | scaffold1009.1 : 4666 ... 29658 : + |
| To GenomeBrowser | scaffold1009.1:4666..29658 |
| Genes list of scaffold | scaffold1009.1 |
| Synonym | pfu_aug2.0_327.1_23866 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1009.1_00579.t1 | 1 | 1 | PX | 52 | 96 | 4.2e-07 | 29.7 | 4.9e-10 | 1.0e-06 | 28.4 |
| pfu_aug1.0_1009.1_00579.t1 | 1 | 1 | Pkinase | 152 | 409 | 0.0 | 235.2 | 0.0 | 0.0 | 234.5 |
| pfu_aug1.0_1009.1_00579.t1 | 1 | 1 | Pkinase_Tyr | 153 | 394 | 1.0e-34 | 119.8 | 8.6e-38 | 1.8e-34 | 118.9 |
| pfu_aug1.0_1009.1_00579.t1 | 2 | 1 | Kinase-like | 157 | 196 | 5.3e-07 | 28.8 | 0.62 | 1300.0 | -2.0 |
| pfu_aug1.0_1009.1_00579.t1 | 2 | 2 | Kinase-like | 265 | 393 | 5.3e-07 | 28.8 | 7.4e-10 | 1.6e-06 | 27.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1009.1_00579.t1 | gi|291221203|ref|XP_002730613.1| | PREDICTED: serine/threonine-protein kinase Sgk3-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1009.1_00579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1009.1_00579.t1 atgtccgacatagagaaaacccaagaactgacagtgacattggaggaacaattatcaaagaaagtatcaaagacgattct gtctaaatcagtgaaaataaagactaaaaaacaaaagaaaggaaacttttggggcttgatgaagtttatgtttcccctac aggtttataaagtgatggtcaacaatggcaggaaaagctggttcatcttcagacgttacaacgagttccactctctacat gaaaagatgaaattccgtgacaaagttggagtttttctccggaagaagatagcggttccagacgtacgtgcatttttagc tctagacaatcccagaaatgctcaggaaccgatagacaacgatacatttgaagactcggacaatatgaatgggcgtgaca taaatcctgttaacttgggtcctagtgagagacaaagtgtcaagccaagtgattttgaatttctgaaggtgattgggaaa ggcagttttggcaaagttcttcttgccaggaacaaacatgaagggaacatttacgccattaaagtgttacaaaaacaggc tataatgaagaggaatgaagtgaaacatatcatggctgagaggaatgtactgcttaaaaatgtgaagcatcctttcctgg tgggactccattattcctttcagacccctgacaaactctactttgtactggactatgttaacggtggagagttatttttc cacctgcaaagagagcgatattttccagagcaacgtgccaaattttatgcagcagaaatggcgagtgccattggctacct ccattcgctcaacatcatttacagagatctcaaacctgaaaatattttactagattcaaaaggacatatcactttgacag actttggtttatgtaaagagggcattgaccattctggtacaacaaacactttctgcggtacacccgagtacttggcacca gaggtattacgtaaacagccatacgacaaaacggtagactggtggtgcttaggggccgtcctgtatgaaatgatgtatgg attgcccccgttctatagtcgtgacacagcggagatgtacgacaacatcctgtacaaacctctacgtttgaggaccaatg tatcggccgctgccaggtctatattagatgggcttctacagaaggaaaaagaaaatcgtctcggtgccaaacgtgatttc caagaaatcaaacaccatgctttctttgccgatatcaactgggatgacttagacgccaaaaaaatcaaccctccttataa tcctaacgtgagtggtcagttagacttgaaacactttgatccagaatttgtccgtgaacctgtacctgcctcagtgggtc gttctatggacagttgtaaactggtcagtgccagtgttatggaggcagataacatgtttcagggcttttcatacgtccca ccggcagaggacgcattcagctag |
|
Protein
| Protein ID | pfu_aug1.0_1009.1_00579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1009.1_00579.t1 MSDIEKTQELTVTLEEQLSKKVSKTILSKSVKIKTKKQKKGNFWGLMKFMFPLQVYKVMVNNGRKSWFIFRRYNEFHSLH EKMKFRDKVGVFLRKKIAVPDVRAFLALDNPRNAQEPIDNDTFEDSDNMNGRDINPVNLGPSERQSVKPSDFEFLKVIGK GSFGKVLLARNKHEGNIYAIKVLQKQAIMKRNEVKHIMAERNVLLKNVKHPFLVGLHYSFQTPDKLYFVLDYVNGGELFF HLQRERYFPEQRAKFYAAEMASAIGYLHSLNIIYRDLKPENILLDSKGHITLTDFGLCKEGIDHSGTTNTFCGTPEYLAP EVLRKQPYDKTVDWWCLGAVLYEMMYGLPPFYSRDTAEMYDNILYKPLRLRTNVSAAARSILDGLLQKEKENRLGAKRDF QEIKHHAFFADINWDDLDAKKINPPYNPNVSGQLDLKHFDPEFVREPVPASVGRSMDSCKLVSASVMEADNMFQGFSYVP PAEDAFS |
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