Gene
| Gene Model ID | pfu_aug1.0_1009.1_00580 |
|---|---|
| Locus | scaffold1009.1 : 30016 ... 34282 : + |
| To GenomeBrowser | scaffold1009.1:30016..34282 |
| Genes list of scaffold | scaffold1009.1 |
| Synonym | pfu_aug2.0_327.1_23865 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1009.1_00580.t1 | 1 | 1 | adh_short | 2 | 93 | 8.7e-16 | 58.2 | 9.2e-19 | 1.0e-15 | 58.0 |
| pfu_aug1.0_1009.1_00580.t1 | 1 | 1 | KR | 2 | 92 | 2.1e-10 | 40.5 | 2.1e-13 | 2.5e-10 | 40.3 |
| pfu_aug1.0_1009.1_00580.t1 | 1 | 1 | adh_short_C2 | 2 | 77 | 2.3e-08 | 34.0 | 2.0e-11 | 2.3e-08 | 34.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1009.1_00580.t1 | gi|72011150|ref|XP_780227.1| | PREDICTED: dehydrogenase/reductase SDR family member 11 [Strongylocentrotus purpuratus] | 3.0e-18 |
Transcript
| Transcript ID | pfu_aug1.0_1009.1_00580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1009.1_00580.t1 atgggaatcggcgaggccacagcaaagaaattggcggcacatggcatgaaagtcgtcgtctgtgctcgtagttttgacaa attagaggctctgtccaaagaaaatgccaacatacatccaatcagatgtgaccttcgggacaaaagcgacatctaccgga tgttccaagagatcagagataaatttggtggtgtggacgtctgtgttaacagtgctgggttatctctggattcccctatc atagacggcgatccggaccagtgggatcatatgtgggaggtattttga |
|
Protein
| Protein ID | pfu_aug1.0_1009.1_00580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1009.1_00580.t1 MGIGEATAKKLAAHGMKVVVCARSFDKLEALSKENANIHPIRCDLRDKSDIYRMFQEIRDKFGGVDVCVNSAGLSLDSPI IDGDPDQWDHMWEVF |
|