Gene
| Gene Model ID | pfu_aug1.0_1009.1_00581 |
|---|---|
| Locus | scaffold1009.1 : 35016 ... 47903 : + |
| To GenomeBrowser | scaffold1009.1:35016..47903 |
| Genes list of scaffold | scaffold1009.1 |
| Synonym | pfu_aug2.0_327.1_23864 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1009.1_00581.t1 | 1 | 1 | adh_short | 8 | 169 | 1.4e-29 | 103.1 | 1.2e-32 | 2.0e-29 | 102.6 |
| pfu_aug1.0_1009.1_00581.t1 | 1 | 1 | KR | 9 | 113 | 4.9e-13 | 49.1 | 5.9e-16 | 9.8e-13 | 48.1 |
| pfu_aug1.0_1009.1_00581.t1 | 1 | 1 | NAD_binding_10 | 10 | 191 | 1.3e-06 | 28.5 | 1.6e-09 | 2.6e-06 | 27.5 |
| pfu_aug1.0_1009.1_00581.t1 | 1 | 1 | adh_short_C2 | 16 | 225 | 5.7e-15 | 55.7 | 5.1e-18 | 8.3e-15 | 55.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1009.1_00581.t1 | gi|349732218|ref|NP_001002143.2| | dehydrogenase/reductase (SDR family) member 11b [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1009.1_00581.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1009.1_00581.t1 atggaacgctggagagggagggttgccttagtaacaggaggttccatgggaatcggcgaggccacagcaaagagattggt gtcacatggcatgaaagtcgtcgtctgtgcgcgtagttttgaaaagttagaggccctgtctaaagaataccagaatatac accctattaaatgtgatttaagggatagagacgacatcacccggatgttcaaggagatcaaggagacccatggagggata gacgtatgcgttaataacgcgggattggcattagagtcccccatcttagatggcgacccggacctatgggatgaaatgtg gaaggtaaatgtaagagccctgtgcctttgtactcaggagtccgtcaaatctatgcgagaacgtaatgtagatgatggtc atataataaacatcaatagtctctcaggtcataggtgtggaaaacaacatttttattcagctaccaagtttgccgtgaca tccctttcggaggggcttcgatgggaactgaatgctgttcaatctaggattcgagttacgagcatcagtccaggtcttgt ccatactaactttgctcacactctgatggggaaagatgccgccgaggacatgtacgctacacgatcgggtttggaggcgg atgacatcgccagaacagtagagactgtgttatcgtcaccaccgcacgttcagggtttggaggtggacgacatcgccgga acagtagatactttattggcgtcaccaccgcacgttcagactgcaaaaagttcttttaccgggaatatgatcaccaaata ttatgcatggtactggacatcgtgtataacccacggggaagttcgtacctcacataatcgtgtgcagcccacggggaagc tcgtaattcacaaaccccgtgggacaattgaattgaaaaccttcggaaggtgtggaaaacatttttatttacctaccaag tttgcagtacgtcgctatcggatggtcttcgatgggaacttaatgctctgcaatctaaagttcgagtcacggtcaaagat tgacaacaatgaacaccaggaccattttatgaatggatggaacagacacgaccaaaatgaagtgcataattcgatattac agagcatcagtccaggtcttgaccatacctactttgctcacactctgatggggaaagatgccgctgaggatatctacgct acacgattgacgaatgaaattatgacgagacacatcgaacaagttgtgtaa |
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Protein
| Protein ID | pfu_aug1.0_1009.1_00581.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1009.1_00581.t1 MERWRGRVALVTGGSMGIGEATAKRLVSHGMKVVVCARSFEKLEALSKEYQNIHPIKCDLRDRDDITRMFKEIKETHGGI DVCVNNAGLALESPILDGDPDLWDEMWKVNVRALCLCTQESVKSMRERNVDDGHIININSLSGHRCGKQHFYSATKFAVT SLSEGLRWELNAVQSRIRVTSISPGLVHTNFAHTLMGKDAAEDMYATRSGLEADDIARTVETVLSSPPHVQGLEVDDIAG TVDTLLASPPHVQTAKSSFTGNMITKYYAWYWTSCITHGEVRTSHNRVQPTGKLVIHKPRGTIELKTFGRCGKHFYLPTK FAVRRYRMVFDGNLMLCNLKFESRSKIDNNEHQDHFMNGWNRHDQNEVHNSILQSISPGLDHTYFAHTLMGKDAAEDIYA TRLTNEIMTRHIEQVV |
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