Gene
| Gene Model ID | pfu_aug1.0_10097.1_24678 |
|---|---|
| Locus | scaffold10097.1 : 3148 ... 14713 : - |
| To GenomeBrowser | scaffold10097.1:3148..14713 |
| Genes list of scaffold | scaffold10097.1 |
| Synonym | pfu_aug2.0_432.1_07512 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10097.1_24678.t1 | 5 | 1 | Ldl_recept_b | 27 | 36 | 2.0e-19 | 69.6 | 0.053 | 160.0 | 2.7 |
| pfu_aug1.0_10097.1_24678.t1 | 3 | 1 | FXa_inhibition | 78 | 112 | 5.1e-06 | 26.4 | 1.7e-09 | 5.1e-06 | 26.4 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 2 | Ldl_recept_b | 166 | 175 | 2.0e-19 | 69.6 | 0.1 | 300.0 | 1.8 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 3 | Ldl_recept_b | 179 | 221 | 2.0e-19 | 69.6 | 1.2e-09 | 3.4e-06 | 27.2 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 4 | Ldl_recept_b | 224 | 263 | 2.0e-19 | 69.6 | 1.3e-09 | 3.9e-06 | 27.0 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 5 | Ldl_recept_b | 266 | 304 | 2.0e-19 | 69.6 | 3.2e-05 | 0.095 | 13.0 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 1 | Ldl_recept_a | 311 | 327 | 3.5e-33 | 113.1 | 0.12 | 370.0 | 1.1 |
| pfu_aug1.0_10097.1_24678.t1 | 3 | 2 | FXa_inhibition | 317 | 353 | 5.1e-06 | 26.4 | 0.0017 | 4.9 | 7.3 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 2 | Ldl_recept_a | 359 | 397 | 3.5e-33 | 113.1 | 5.0e-12 | 1.5e-08 | 34.3 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 3 | Ldl_recept_a | 401 | 436 | 3.5e-33 | 113.1 | 1.9e-13 | 5.6e-10 | 38.9 |
| pfu_aug1.0_10097.1_24678.t1 | 3 | 3 | FXa_inhibition | 414 | 441 | 5.1e-06 | 26.4 | 0.047 | 140.0 | 2.7 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 4 | Ldl_recept_a | 438 | 473 | 3.5e-33 | 113.1 | 9.9e-11 | 2.9e-07 | 30.2 |
| pfu_aug1.0_10097.1_24678.t1 | 5 | 5 | Ldl_recept_a | 476 | 510 | 3.5e-33 | 113.1 | 4.6e-13 | 1.4e-09 | 37.7 |
Transcript
| Transcript ID | pfu_aug1.0_10097.1_24678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10097.1_24678.t1 atgcttctgaatttgagtgacgtaagtgggcggatctccgatgattgggactgccagtctgtcactgtacatgatgattt tgtctactggattgacttggctattgacactggtgttattcgagcagtcaacaagaataccaagacagtgaccacaggat ggacggggttatctcctaacatgcacagcctccggacctttgatagcagcatacaaacaggttcgaatccttgcaaagta aacaatggtgaatgtaaagatctgtgcttttatgatggaaaaagtgtgacgtgcgcatgttcctacggggtattgactga ggacggcaaagattgcacagctgtggggtcagccgaaggaatagcgtacgatgaattctccaacttcctgtactggacca gctactctgactcaacgatcaaccgaaaactcctgaacttcacaagcaaagtcacaaacgactctttgaaggagactgtg attaccctttctagtaacgaccatccccgagccattgtattggatgcttgtagtcaacgaatgttttggacaaactggaa cgatttccacccgaccatccagcgagcattcttcagtggctataatgccacctccatcatcactaaggacatacggacac ctaacggcttgaccatcgaccacaaggctcagagactgtactggtcagatgccagactggacaagatcgaacgctgcgat tttgatggaaataacagagagataatagtaacgaccatcccgcagcactcatttggcctggctttgtacggagagtattt atactggactgattggatgagacgtgcggtggtgagagccaataaacacgatggtaacatctacacctacctcaggaaag gattacagagacagccaatgggaatcgctgttgtagctgaggatgctaacgactgcaccacaaacccatgtctcaacaac attctacagtgtgaaggaaaatgtcaagttacaccacgtcatgtaccgtattgtaaatgtgaaccaccgaaagtgctcgc agaggatggtgttagatgtataagacaagaacttcactgtggagtgaatgattttgtgtgtcatgatgggtccaagtgtt ttcccagaattcaagtttgtaatggtgtcacggactgcctggacgggagtgacgagtttagagctgtctgcaataaggag gaatgtggacctggattctacacttgcaaaaatcaccagtgtgcttcattgaacgcacggtgtgacggcactccaaactg catggacggatcagacgagaaagattgtctgtgtcaagaaggccagtttaagtgcgtttccgaggacaagtgcgttgaca ataaattcgtgtgcgactttgaccctgattgtatagatcattcagacgagatgggatgcatgtatacatgtccacctaag atgtttaactgttcagaccagctctgtttaccccagtcatggcagtgcgacagctatcccgactgtcctaacggcacaga tgaactcgagtcgatatgcagtgagtactattttaaccagttggtttaa |
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Protein
| Protein ID | pfu_aug1.0_10097.1_24678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10097.1_24678.t1 MLLNLSDVSGRISDDWDCQSVTVHDDFVYWIDLAIDTGVIRAVNKNTKTVTTGWTGLSPNMHSLRTFDSSIQTGSNPCKV NNGECKDLCFYDGKSVTCACSYGVLTEDGKDCTAVGSAEGIAYDEFSNFLYWTSYSDSTINRKLLNFTSKVTNDSLKETV ITLSSNDHPRAIVLDACSQRMFWTNWNDFHPTIQRAFFSGYNATSIITKDIRTPNGLTIDHKAQRLYWSDARLDKIERCD FDGNNREIIVTTIPQHSFGLALYGEYLYWTDWMRRAVVRANKHDGNIYTYLRKGLQRQPMGIAVVAEDANDCTTNPCLNN ILQCEGKCQVTPRHVPYCKCEPPKVLAEDGVRCIRQELHCGVNDFVCHDGSKCFPRIQVCNGVTDCLDGSDEFRAVCNKE ECGPGFYTCKNHQCASLNARCDGTPNCMDGSDEKDCLCQEGQFKCVSEDKCVDNKFVCDFDPDCIDHSDEMGCMYTCPPK MFNCSDQLCLPQSWQCDSYPDCPNGTDELESICSEYYFNQLV |
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