Gene
| Gene Model ID | pfu_aug1.0_10099.1_31877 |
|---|---|
| Locus | scaffold10099.1 : 12376 ... 26995 : - |
| To GenomeBrowser | scaffold10099.1:12376..26995 |
| Genes list of scaffold | scaffold10099.1 |
| Synonym | pfu_aug2.0_219.1_30456 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10099.1_31877.t1 | 2 | 1 | DUF258 | 249 | 284 | 1.3e-08 | 34.2 | 9.3e-05 | 0.049 | 12.8 |
| pfu_aug1.0_10099.1_31877.t1 | 2 | 1 | AIG1 | 263 | 284 | 0.0 | 212.3 | 4.7e-08 | 2.5e-05 | 23.4 |
| pfu_aug1.0_10099.1_31877.t1 | 2 | 1 | MMR_HSR1 | 264 | 284 | 2.9e-12 | 46.5 | 0.00038 | 0.2 | 11.5 |
| pfu_aug1.0_10099.1_31877.t1 | 2 | 1 | FeoB_N | 264 | 286 | 2.1e-07 | 30.3 | 0.13 | 68.0 | 2.6 |
| pfu_aug1.0_10099.1_31877.t1 | 2 | 2 | AIG1 | 289 | 489 | 0.0 | 212.3 | 0.0 | 0.0 | 192.3 |
| pfu_aug1.0_10099.1_31877.t1 | 2 | 2 | DUF258 | 289 | 354 | 1.3e-08 | 34.2 | 6.3e-07 | 0.00033 | 19.8 |
| pfu_aug1.0_10099.1_31877.t1 | 2 | 2 | MMR_HSR1 | 290 | 387 | 2.9e-12 | 46.5 | 6.1e-12 | 3.2e-09 | 36.7 |
| pfu_aug1.0_10099.1_31877.t1 | 2 | 2 | FeoB_N | 290 | 360 | 2.1e-07 | 30.3 | 1.3e-08 | 7.1e-06 | 25.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_10099.1_31877.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10099.1_31877.t1 atggagttagatgcattcgattcattatcaaccgttcaagaagttcataactgtctacggaaaaagatttgtctggacta tttaccgaattatcccaaggacaacagaaaatcgttcctggtgttcaaagccaacagtcgtaattacctcagtgtagcgg agtacagtctaggtgatcctacgaggatatttgacgcgttggaaacaaaaggcaagataaggcccggtgaatactccaca ttgacatggcttgtagttgatgcggacaaaagaatcctcggtttaatatatactgctgagaaacgaatcaaacaaataat tggtcattttccaggaaccatgcctatcattgttgtgttttccgtttgcttccttgctatggtcctgacaaagacagccc aatctgagaacaatgtcaactattgtccatcagatagcttcctatcatatgttatgaaggagattagagatgcaagcaaa gtgagaaaacaaaacaacattcagaggacggaactttgtgacgccgatgaaaacttaattcacaaagaaaatggtcattt tccaggaaccatgcctatcatcgttgtgttttccgtttgcttccttgctatggtcctgacaaagacagcccaatctgaga acaacgtcaactattgtccatcagatagcttcctatcatatgttatgaaggagattagagagtgcaaagtaagagatacg aaagcattgcctgaaaaaccaccaaccaacaatactgaacatatacaagatattgttggagatgagttaaggatcttgct aatcggaaaaaccggtgttggaaaaagtacaacaggaaacagaatccttggtatcgaacacgaaagacgaattcttgtta ttggaaagacaggggtaggcaaaagttccacatgtaacaggatacttgggaaggaagaattcgatgctgaagcctcagac gaatctgtcaccatcgaaacgaaacttggcctggctttacgaaatggcaaaacatatatggtaatagatacaccagggtt gtttgataccaaaacatctaatgatgaaaccattgcagaaataatgaaatgctatggtctcacgtcgcctggtctacatg ctatacttcttgtacaagaaattggacgtatgacggacgagcagcgagaaactattgaaatcttcgaagacagatttggg aagaatttaagcaattttttaattgtagtttttactggtaaaaataaacttaaaaaaggacaaaacattgatgattatgt ttccagagtaaatccaggatctaatttgagtagactgcttaatcgcgtcgacaacagatttgtggcttttgggaacgatg aggacgatgaggaagaggtgaaagatttgctcgctttgatagagaaagtcattgaaagcaacggaggcaagtattatacg aatgaaatgtaccagcaagctgagacgattctttacgctcgtcttgaagaagctagaaggcgagaacaggaaagacttga caaggagaaagaagaacttctaaaagaaacaaacgaagaacatgaaaagaaacaaagggatctgcaagaaaaacttgatg agaaggaaagggaacttaaagaagaaagagaaagatccccagaccgcgataatagtatattcggaaaagcaagtagggag tgggggagatttaaaaaaacgacttaa |
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Protein
| Protein ID | pfu_aug1.0_10099.1_31877.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10099.1_31877.t1 MELDAFDSLSTVQEVHNCLRKKICLDYLPNYPKDNRKSFLVFKANSRNYLSVAEYSLGDPTRIFDALETKGKIRPGEYST LTWLVVDADKRILGLIYTAEKRIKQIIGHFPGTMPIIVVFSVCFLAMVLTKTAQSENNVNYCPSDSFLSYVMKEIRDASK VRKQNNIQRTELCDADENLIHKENGHFPGTMPIIVVFSVCFLAMVLTKTAQSENNVNYCPSDSFLSYVMKEIRECKVRDT KALPEKPPTNNTEHIQDIVGDELRILLIGKTGVGKSTTGNRILGIEHERRILVIGKTGVGKSSTCNRILGKEEFDAEASD ESVTIETKLGLALRNGKTYMVIDTPGLFDTKTSNDETIAEIMKCYGLTSPGLHAILLVQEIGRMTDEQRETIEIFEDRFG KNLSNFLIVVFTGKNKLKKGQNIDDYVSRVNPGSNLSRLLNRVDNRFVAFGNDEDDEEEVKDLLALIEKVIESNGGKYYT NEMYQQAETILYARLEEARRREQERLDKEKEELLKETNEEHEKKQRDLQEKLDEKERELKEERERSPDRDNSIFGKASRE WGRFKKTT |
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