Gene
| Gene Model ID | pfu_aug1.0_1010.1_29528 |
|---|---|
| Locus | scaffold1010.1 : 38766 ... 52850 : + |
| To GenomeBrowser | scaffold1010.1:38766..52850 |
| Genes list of scaffold | scaffold1010.1 |
| Synonym | pfu_aug2.0_1229.1_31538 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1010.1_29528.t1 | 10 | 1 | LRR_6 | 146 | 159 | 6.8e-11 | 41.0 | 0.052 | 86.0 | 3.6 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 1 | LRR_4 | 146 | 164 | 3.7e-25 | 87.0 | 0.0085 | 14.0 | 5.4 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 1 | LRR_7 | 147 | 159 | 4.2e-11 | 41.1 | 0.064 | 110.0 | 3.7 |
| pfu_aug1.0_1010.1_29528.t1 | 5 | 1 | LRR_8 | 147 | 203 | 5.0e-38 | 128.6 | 6.3e-06 | 0.01 | 15.5 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 2 | LRR_4 | 147 | 188 | 3.7e-25 | 87.0 | 5.9e-07 | 0.00097 | 18.7 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 1 | LRR_1 | 147 | 161 | 2.2e-21 | 72.5 | 0.052 | 86.0 | 3.7 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 2 | LRR_7 | 170 | 184 | 4.2e-11 | 41.1 | 0.0044 | 7.2 | 7.2 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 2 | LRR_6 | 170 | 183 | 6.8e-11 | 41.0 | 0.0048 | 7.9 | 6.8 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 3 | LRR_4 | 171 | 210 | 3.7e-25 | 87.0 | 1.2e-07 | 0.00019 | 20.9 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 2 | LRR_1 | 172 | 190 | 2.2e-21 | 72.5 | 0.00042 | 0.7 | 10.1 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 3 | LRR_6 | 191 | 205 | 6.8e-11 | 41.0 | 0.25 | 410.0 | 1.6 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 3 | LRR_1 | 193 | 208 | 2.2e-21 | 72.5 | 0.24 | 400.0 | 1.7 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 4 | LRR_6 | 257 | 268 | 6.8e-11 | 41.0 | 0.55 | 910.0 | 0.5 |
| pfu_aug1.0_1010.1_29528.t1 | 5 | 2 | LRR_8 | 258 | 313 | 5.0e-38 | 128.6 | 1.7e-11 | 2.8e-08 | 33.4 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 4 | LRR_4 | 258 | 292 | 3.7e-25 | 87.0 | 7.7e-07 | 0.0013 | 18.3 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 4 | LRR_1 | 258 | 272 | 2.2e-21 | 72.5 | 0.18 | 300.0 | 2.1 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 5 | LRR_6 | 278 | 292 | 6.8e-11 | 41.0 | 0.00042 | 0.7 | 10.1 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 3 | LRR_7 | 280 | 293 | 4.2e-11 | 41.1 | 0.0057 | 9.5 | 6.9 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 5 | LRR_1 | 280 | 300 | 2.2e-21 | 72.5 | 0.0013 | 2.2 | 8.6 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 6 | LRR_6 | 303 | 315 | 6.8e-11 | 41.0 | 0.33 | 540.0 | 1.2 |
| pfu_aug1.0_1010.1_29528.t1 | 5 | 3 | LRR_8 | 304 | 362 | 5.0e-38 | 128.6 | 2.6e-15 | 4.3e-12 | 45.5 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 5 | LRR_4 | 304 | 344 | 3.7e-25 | 87.0 | 4.3e-08 | 7.0e-05 | 22.3 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 6 | LRR_1 | 305 | 326 | 2.2e-21 | 72.5 | 0.0041 | 6.8 | 7.1 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 7 | LRR_6 | 326 | 345 | 6.8e-11 | 41.0 | 0.00011 | 0.18 | 11.9 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 4 | LRR_7 | 329 | 342 | 4.2e-11 | 41.1 | 0.0006 | 1.0 | 9.8 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 6 | LRR_4 | 329 | 366 | 3.7e-25 | 87.0 | 2.5e-10 | 4.2e-07 | 29.4 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 7 | LRR_1 | 329 | 348 | 2.2e-21 | 72.5 | 1.8e-05 | 0.029 | 14.3 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 8 | LRR_6 | 350 | 363 | 6.8e-11 | 41.0 | 0.11 | 180.0 | 2.6 |
| pfu_aug1.0_1010.1_29528.t1 | 5 | 4 | LRR_8 | 351 | 410 | 5.0e-38 | 128.6 | 3.6e-14 | 5.9e-11 | 41.9 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 8 | LRR_1 | 352 | 374 | 2.2e-21 | 72.5 | 0.00094 | 1.5 | 9.1 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 5 | LRR_7 | 352 | 367 | 4.2e-11 | 41.1 | 0.0021 | 3.5 | 8.2 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 9 | LRR_1 | 377 | 396 | 2.2e-21 | 72.5 | 0.054 | 89.0 | 3.7 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 6 | LRR_7 | 377 | 391 | 4.2e-11 | 41.1 | 0.66 | 1100.0 | 0.7 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 7 | LRR_4 | 377 | 414 | 3.7e-25 | 87.0 | 2.7e-05 | 0.045 | 13.3 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 7 | LRR_7 | 399 | 414 | 4.2e-11 | 41.1 | 0.0097 | 16.0 | 6.2 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 8 | LRR_4 | 399 | 438 | 3.7e-25 | 87.0 | 4.6e-09 | 7.5e-06 | 25.4 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 10 | LRR_1 | 400 | 422 | 2.2e-21 | 72.5 | 0.0003 | 0.5 | 10.6 |
| pfu_aug1.0_1010.1_29528.t1 | 5 | 5 | LRR_8 | 400 | 454 | 5.0e-38 | 128.6 | 2.6e-12 | 4.2e-09 | 36.0 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 9 | LRR_6 | 401 | 413 | 6.8e-11 | 41.0 | 0.14 | 230.0 | 2.3 |
| pfu_aug1.0_1010.1_29528.t1 | 8 | 8 | LRR_7 | 423 | 435 | 4.2e-11 | 41.1 | 0.028 | 47.0 | 4.8 |
| pfu_aug1.0_1010.1_29528.t1 | 11 | 11 | LRR_1 | 424 | 436 | 2.2e-21 | 72.5 | 0.00089 | 1.5 | 9.1 |
| pfu_aug1.0_1010.1_29528.t1 | 10 | 10 | LRR_6 | 424 | 435 | 6.8e-11 | 41.0 | 0.051 | 85.0 | 3.7 |
| pfu_aug1.0_1010.1_29528.t1 | 1 | 1 | 7tm_1 | 505 | 763 | 1.1e-29 | 103.4 | 9.4e-33 | 1.5e-29 | 102.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1010.1_29528.t1 | gi|115764766|ref|XP_001195409.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1010.1_29528.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1010.1_29528.t1 atgacaactccaactaacaaactgcgcatgctaacaggagatgtgacactctgtggaccagatgaagtgacttgtaacga aacagtcccttgtattccaaggacatcaacgatagaagagaagaccgcgtgcctcaatggtgaatgtcctacaaaccgta catgtctgatatttaatgataacgttgaaatgaaggcgaacgcttcaaattatactgaggtttgtattcatgaaaacgaa atttgtgatggcgtatcacactgttcatcaggtgaagatgaggaaaattgcgcatgcccagacggatgtactcgatgtca aggctcatcttacaaatgtcgcccagaaagtctacccgaaattcctcagatggcaaagtcaatcgacatttctggttata agatggatattggtattttgtgtaacatgactcgaaagcatttagaaaaattagatgtctcaaatacaaaagtccaaaat ctgaaatgtttagatgataaatactttcctgctttacaggaattagacgtgtcaagcaataatataacggttctcgacaa actaaattttccaacgctaaagacaattcgtgtggacaataatcctatccagaaactgtactttttatctagtattagta tgactatcaggaatgcaaatattaaaagaatggaatggatcattaatgaaaatgaccccattgcacccttagcttttaag ccagtcatcaattacacagagccggatccaatgggcgcaaaaatagaatgcaaactcaaagctattgatcttagctacaa cagtatgccgcttctagatacgcttggtcattgtcaatcactgaaagagctgaatcttgctagaaacaagataacagttc ttgatttctggtcttttaatggaatgcagtcaatagaaaaggtagacctgagctacaattggcttgaatctatacaaaaa tcaaacttttttggattgacctttcttcaagagctagatctatcttataatcgactaaccaaactagatcctgaatcctt cttcgatctgagcaagttgaagatactccgactaaacaataacaagtttcagactcttccatggcctgttttcagtggtc ttgttgctttggaaaagatgtatcttcaggaaaacaaacttaaaacactgcctttaaaaatctttcaaaggacgacaaaa ctcttgagactggatcttcgaaacaacaaccttacggagcttgtgcacggtatatttatgtcactcggtaaactggaata tttagatctcagaggaaacgaaatccaagcttatgaggccatgttcagtggacttggtgtgcttgaaaagctaagggtac atagtttcaccctatgttgctctagaccagctagtgttggaataaatgattgcgaagctcctgctgatatattttcatca tgcaccaacttgataaatttaggttttctaagtgtatgtatctggtttactgccattatgtcggtttttggtaacatgat ggctgtaatttacagaatccgtgaaggaacatggataaaagagatgagggatatttttatctcaagcctttgcttatcgg acatgtgtatgggtgtgtacttgtttatcattgcattcacagacgttcaatccagaggggaatatggctattatcaccaa caatggacgaagagtcgattgtgcgacgctgcaggggtgttggtcactgcatccagtgaggcttctacccttttcatctt ggccattaccttagaccgctacacggttttcaagtatccattctcgcagaatgtccataagcgctcgattgccattgcat cgatgattgtcatctggattttcgccatagtcgtggcgattatcccgttcttcttccccgacttctttggtggcagtttc tacacccgctccagtgtgtgtatttccttacccctgactccgacaacgctccagtacagcggttgggaatattcggtcgg tctattcatcgtcttcaacctgttcgtctattttatagttgtggctgggcaaattttcatattcaaggaaatacgcagaa gtggagtccagaatgacaagaaaagggaaagagaaattgccgttgctaagaatctgtcggctgttgtgatcagtgacacc ttgtgctggattccagttgcgattgtgggatttttcgctctgaatgggattgacgtcaccaatgacgtatatgcttggat catcgtgtttgtcttacctgtcaactcggcgataaacccttttctgtacacgttccttgccattcgacgtaagcgtgcaa agaatcaacctaaatctagtgaagagagatccggctcagctaagcttcatattgaagagattcgaccacaagaagtgccc tgtagcgggatagagaaaactaataattgggattgtatggttattataaccgaccctgaaatatccgacaatacggagat tgatgttatattttctgacaatgaaggctggtcaaagaagtcagacgatgtggaaattctgtatgagattatacgatgct cagtgccaccatacaaagaggagatagaagagcagaaagagcttaaagtccaagtccttgtgaagagaacaacggagaaa actccgccgtattcaatcagctggatcccacagtgcaccagcataactgatatttcactccaagaaatcaagaatgagca ttcaaagctttga |
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Protein
| Protein ID | pfu_aug1.0_1010.1_29528.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1010.1_29528.t1 MTTPTNKLRMLTGDVTLCGPDEVTCNETVPCIPRTSTIEEKTACLNGECPTNRTCLIFNDNVEMKANASNYTEVCIHENE ICDGVSHCSSGEDEENCACPDGCTRCQGSSYKCRPESLPEIPQMAKSIDISGYKMDIGILCNMTRKHLEKLDVSNTKVQN LKCLDDKYFPALQELDVSSNNITVLDKLNFPTLKTIRVDNNPIQKLYFLSSISMTIRNANIKRMEWIINENDPIAPLAFK PVINYTEPDPMGAKIECKLKAIDLSYNSMPLLDTLGHCQSLKELNLARNKITVLDFWSFNGMQSIEKVDLSYNWLESIQK SNFFGLTFLQELDLSYNRLTKLDPESFFDLSKLKILRLNNNKFQTLPWPVFSGLVALEKMYLQENKLKTLPLKIFQRTTK LLRLDLRNNNLTELVHGIFMSLGKLEYLDLRGNEIQAYEAMFSGLGVLEKLRVHSFTLCCSRPASVGINDCEAPADIFSS CTNLINLGFLSVCIWFTAIMSVFGNMMAVIYRIREGTWIKEMRDIFISSLCLSDMCMGVYLFIIAFTDVQSRGEYGYYHQ QWTKSRLCDAAGVLVTASSEASTLFILAITLDRYTVFKYPFSQNVHKRSIAIASMIVIWIFAIVVAIIPFFFPDFFGGSF YTRSSVCISLPLTPTTLQYSGWEYSVGLFIVFNLFVYFIVVAGQIFIFKEIRRSGVQNDKKREREIAVAKNLSAVVISDT LCWIPVAIVGFFALNGIDVTNDVYAWIIVFVLPVNSAINPFLYTFLAIRRKRAKNQPKSSEERSGSAKLHIEEIRPQEVP CSGIEKTNNWDCMVIITDPEISDNTEIDVIFSDNEGWSKKSDDVEILYEIIRCSVPPYKEEIEEQKELKVQVLVKRTTEK TPPYSISWIPQCTSITDISLQEIKNEHSKL |
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