Gene
| Gene Model ID | pfu_aug1.0_1014.1_65739 |
|---|---|
| Locus | scaffold1014.1 : 17556 ... 36018 : + |
| To GenomeBrowser | scaffold1014.1:17556..36018 |
| Genes list of scaffold | scaffold1014.1 |
| Synonym | pfu_aug2.0_485.1_17477 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1014.1_65739.t1 | 3 | 1 | DUF3808 | 42 | 86 | 1.7e-40 | 139.0 | 3.1e-16 | 1.5e-12 | 46.8 |
| pfu_aug1.0_1014.1_65739.t1 | 3 | 2 | DUF3808 | 84 | 169 | 1.7e-40 | 139.0 | 1.4e-26 | 7.0e-23 | 80.9 |
| pfu_aug1.0_1014.1_65739.t1 | 3 | 3 | DUF3808 | 170 | 198 | 1.7e-40 | 139.0 | 1.1e-05 | 0.054 | 12.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1014.1_65739.t1 | gi|260792880|ref|XP_002591442.1| | hypothetical protein BRAFLDRAFT_205333 [Branchiostoma floridae] | 3.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_1014.1_65739.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1014.1_65739.t1 atggataccaatgagataccgatagattcctcggacttggacgagtctttagacttggagaaggatgtcttaaaagaagt gtcatgtgacatggaccttgctgatatgatagagcaggctaaaatggcgctacgactcttccttaataacagattctcag aggcaaaagaaagaatgaaaccattgtctgagtccagtatgtatcactcccttggatacggtaccatcctctacttacag gctgtcatgacatttgatatgatgatatcattgcttccaagtaaaattttgaagcttctagaatttgttggattctcagg gaataagagacatggacttcgtaatctcaaagacggcagtgataatctgaacagtctgcgaggccctctgtgttcaatag tcttgatagcatatcatactgtagtgtgttatgttttaggtttagctgatggtgacatagatcttgctgatcagttattg cagccttgcttaaaagattatcctaaggaattagtgtatgtttggaatggatttagtattattgggaagaaggatggact gctggatccagtattagctatagtggagaaaaccgtgacaaacatcacagaaaataaagtttatgaataa |
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Protein
| Protein ID | pfu_aug1.0_1014.1_65739.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1014.1_65739.t1 MDTNEIPIDSSDLDESLDLEKDVLKEVSCDMDLADMIEQAKMALRLFLNNRFSEAKERMKPLSESSMYHSLGYGTILYLQ AVMTFDMMISLLPSKILKLLEFVGFSGNKRHGLRNLKDGSDNLNSLRGPLCSIVLIAYHTVVCYVLGLADGDIDLADQLL QPCLKDYPKELVYVWNGFSIIGKKDGLLDPVLAIVEKTVTNITENKVYE |
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