Gene
| Gene Model ID | pfu_aug1.0_1014.1_65742 |
|---|---|
| Locus | scaffold1014.1 : 58476 ... 63218 : + |
| To GenomeBrowser | scaffold1014.1:58476..63218 |
| Genes list of scaffold | scaffold1014.1 |
| Synonym | pfu_aug2.0_485.1_17479 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1014.1_65742.t1 | 1 | 1 | efThoc1 | 3 | 73 | 1.1e-08 | 34.0 | 2.3e-12 | 1.7e-08 | 33.4 |
| pfu_aug1.0_1014.1_65742.t1 | 1 | 1 | Death | 113 | 189 | 2.2e-14 | 52.9 | 5.7e-18 | 4.2e-14 | 52.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1014.1_65742.t1 | gi|260829829|ref|XP_002609864.1| | hypothetical protein BRAFLDRAFT_126015 [Branchiostoma floridae] | 5.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1014.1_65742.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1014.1_65742.t1 atggaacaagcagatcctgatgcacatatcgagcatgagtacaagttggtccataatcagattttccagtggaaatctct ccgtctgctggccagaaggagtccacatttcttcaatcagacgaccacccctgccatgcccctccctcagtacctagatc tcatgctacagaaaatagccaaagaaatccctcaaactgtcaacaatgaggagatgaggacagatgttggtgaggaggag acgataaaggaagggcacgatgaggaggatctcaaacaggcagatgagcaagatgtagcaggtgatgaggaggcagcaga tgatcctttgacaaaagaacaactacaactaatgtcagagaaactcggagaagactggaagaggctggccatagaactga acttccctgaggatgacctcgcttactttgaaactgagaatgaactggacagtcagagagcattcaaaatgctgaccatc tggcaggaaaaggaagaggacagggcaacatgtggttcactaaagattgccttaaaagaagtaggcctacctgaggtgat cgaagctgtgtttggagaatga |
|
Protein
| Protein ID | pfu_aug1.0_1014.1_65742.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1014.1_65742.t1 MEQADPDAHIEHEYKLVHNQIFQWKSLRLLARRSPHFFNQTTTPAMPLPQYLDLMLQKIAKEIPQTVNNEEMRTDVGEEE TIKEGHDEEDLKQADEQDVAGDEEAADDPLTKEQLQLMSEKLGEDWKRLAIELNFPEDDLAYFETENELDSQRAFKMLTI WQEKEEDRATCGSLKIALKEVGLPEVIEAVFGE |
|