Gene
| Gene Model ID | pfu_aug1.0_10149.1_17585 |
|---|---|
| Locus | scaffold10149.1 : 6276 ... 17911 : + |
| To GenomeBrowser | scaffold10149.1:6276..17911 |
| Genes list of scaffold | scaffold10149.1 |
| Synonym | pfu_aug2.0_15072.1_09884 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10149.1_17585.t1 | 1 | 1 | Lactamase_B | 27 | 160 | 4.9e-15 | 55.6 | 1.2e-17 | 6.0e-14 | 52.1 |
| pfu_aug1.0_10149.1_17585.t1 | 1 | 1 | Lactamase_B_2 | 37 | 150 | 1.5e-07 | 31.1 | 3.9e-11 | 1.9e-07 | 30.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10149.1_17585.t1 | gi|260815481|ref|XP_002602501.1| | hypothetical protein BRAFLDRAFT_227287 [Branchiostoma floridae] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug1.0_10149.1_17585.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10149.1_17585.t1 atgtacgaagttatagtacttagagatgggtatagcagggatgatgaaggcgaaggaatatacagtatgagagctgcttg taccatcacattggtcaagggaccaaagaacattattgtagatccaggtagtccatgggaaaaacaatttgttattgaca gtctgaaaaagcatggtctcgattgtgatcaaataaactatgttgtgtgtacgcatggacactcagatcatatcggtaac ctgaacttgtttaccaatgctgtacatatagtatcttacgatatttgttttggagatcagtatgtgtcccactcctttca gcatggaataccctacgagatagatgaaggcagagtagaagtagttcccacaccaggccataccggatccgatgtcaccg tcctggtcagggacaccaaacaaggaactgttgccatcgctggagatttatttgagcgggaagaagaccttgataaccca catctatggcaaaataatagtgaaaatgaagaagtacagncagcaaagtcgtataaatatcctacaaattgcagacatga tcattcctggccatggtgctatgtttaa |
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Protein
| Protein ID | pfu_aug1.0_10149.1_17585.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10149.1_17585.t1 MYEVIVLRDGYSRDDEGEGIYSMRAACTITLVKGPKNIIVDPGSPWEKQFVIDSLKKHGLDCDQINYVVCTHGHSDHIGN LNLFTNAVHIVSYDICFGDQYVSHSFQHGIPYEIDEGRVEVVPTPGHTGSDVTVLVRDTKQGTVAIAGDLFEREEDLDNP HLWQNNSENEEVQXAKSYKYPTNCRHDHSWPWCYV |
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