Gene
| Gene Model ID | pfu_aug1.0_1015.1_00584 |
|---|---|
| Locus | scaffold1015.1 : 1 ... 22726 : + |
| To GenomeBrowser | scaffold1015.1:1..22726 |
| Genes list of scaffold | scaffold1015.1 |
| Synonym | pfu_aug2.0_586.1_20943 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1015.1_00584.t1 | 1 | 1 | V_ATPase_I | 1 | 132 | 1.0e-37 | 129.4 | 1.70006e-41 | 1.2e-37 | 129.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1015.1_00584.t1 | gi|126307918|ref|XP_001363526.1| | PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1 isoform X1 [Monodelphis domestica] | 2.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1015.1_00584.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1015.1_00584.t1 gtatgatccagatgtttttattccagtctgctaaaacatggtaccctggacagagtgagttccagggtttcctggtcttc ctagcggctatcagcgttccgtggatgtggctggtgaagccgctttacctcagacaccaacacaagtatggacagttaaa acatcaatacactcaactgcctagtaatgactcggcataccatgacgacgttgacgccccagaggtcatttaccatgacg accaagaggtcattgtccatgatgaccccccaccagaggaatttgattttggagaggtatttattcatcaaacaatccat acgatagagttctgcctgggatgtatatcacacacggcatcctacctacgactctgggcgctcagtctggcacacgcacc aagtggagggggtcaagaatttcttcatatttgtgtatttttgtga |
|
Protein
| Protein ID | pfu_aug1.0_1015.1_00584.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1015.1_00584.t1 MIQMFLFQSAKTWYPGQSEFQGFLVFLAAISVPWMWLVKPLYLRHQHKYGQLKHQYTQLPSNDSAYHDDVDAPEVIYHDD QEVIVHDDPPPEEFDFGEVFIHQTIHTIEFCLGCISHTASYLRLWALSLAHAPSGGGQEFLHICVFL |
|