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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10179.1_10085
Locus scaffold10179.1 : 1 ... 12574 : +
To GenomeBrowser scaffold10179.1:1..12574
Genes list of scaffold scaffold10179.1
Synonym pfu_aug2.0_223.1_10469

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10179.1_10085.t1 1 1 7tm_1 34 535 1.2e-30 106.5 2.9e-33 1.1e-29 103.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10179.1_10085.t1 gi|31209163|ref|XP_313548.1| AGAP004675-PA [Anopheles gambiae str. PEST] 7.0e-38

Transcript
Transcript IDpfu_aug1.0_10179.1_10085.t1
Definition-
>pfu_aug1.0_10179.1_10085.t1
cccaattttgctatgtctgagaggccctgtgatcattccagttgctctcaataatctagatgacgacatgtacacttgtg
taacctacaattacctgtatcggttcttctccgtgaagattcccgccaaatatcgcaactggcgaacggagcgaaaagtg
gtgataatgctagccatgtcgtggattattcctacgcttattttcttcacctcagtcattggctggcagtacttcgtcgg
cgaaaggtcagtaaaaccgtacgaatgtgaggtacagtttatgagtgatccgttgtttacattatttttaactctgggat
actactggactttccttttcatcatgatcggactttacgctggaatttaccgtgtggcactttcactacaaaagaaagca
gaagcgaaacagaagaaaattacgactgcgatggagttggctggcgacaggggcaaccaggctaaaccgccccctaccgt
gggggcagcgaataagaatagtaagaaaaggattgagaataataatgccaggaacctgcgcggtatagaatcgaccacgt
ttacgaagaatgcccctgctgaggaggacaggtccagctcacctgcattcgcctctgatgaggaaaatagtagttccggt
aacgcatgcgcaacaagcaaaactccattgaattacagaaatgatcttgatgacgacgatgacgagcagacgtgctttgt
caacagcgcagtacaaacggatacgacatatcggccatctttaaaaggaatgctgggaatgtccttcaatcacgtgtcaa
aaatagccctgtcgatcagtggtactagtggattagagcagagcagtgtagatagtccagagaaaaatgttgttatagaa
aacacaagcaatgacaataagtatgtcacatcctttgataagattgacaatgaggatgataacttttccgaaaagtatcc
aaaacccaccgataaacttttggagaacgatatcttacaagggtgtaagtacattgacgaggatagctttaaaacattgt
cagcatccgaaaatatcaagcttcttcctgacttggatatatcacgtgacacgtatgtgtcatcggacgataaactttcg
ccgatttggaagaaacgcgcaggtcgttgtgtactcctaccggaggaatcgaccatgtgtacaagttcaaccattataga
cgaggaaatagccccggataacaacgagcaggagacaacaccacttccggtaaacggaagcactccgactgcgcaatgcg
ataacaaacacgtcgcggcagtgaaaaactcgaactctgacaaaaaatcattcggaagtcctcttcatgcactcgtcaaa
tccatgcgcgagaagcagaagaagaggaatagaagggccaaagcaaattccaaatctgaaaatagagcgcgaaaagcctt
acgaacaattacatttattcttggtgcatacctgatgtgttggacaccgtatcacgtgatgattctaattataggactat
gtcagacatgcgtgtatccagtacagatttatcatttctcgtactggttatgctacttaaacagtcccataaatccattc
tgctacgctttagccaatcaacaatttaaaaggacattcactaggattttgaaattagattgtcatagaacttaa

Protein
Protein IDpfu_aug1.0_10179.1_10085.t1
Definition-
>pfu_aug1.0_10179.1_10085.t1
PILLCLRGPVIIPVALNNLDDDMYTCVTYNYLYRFFSVKIPAKYRNWRTERKVVIMLAMSWIIPTLIFFTSVIGWQYFVG
ERSVKPYECEVQFMSDPLFTLFLTLGYYWTFLFIMIGLYAGIYRVALSLQKKAEAKQKKITTAMELAGDRGNQAKPPPTV
GAANKNSKKRIENNNARNLRGIESTTFTKNAPAEEDRSSSPAFASDEENSSSGNACATSKTPLNYRNDLDDDDDEQTCFV
NSAVQTDTTYRPSLKGMLGMSFNHVSKIALSISGTSGLEQSSVDSPEKNVVIENTSNDNKYVTSFDKIDNEDDNFSEKYP
KPTDKLLENDILQGCKYIDEDSFKTLSASENIKLLPDLDISRDTYVSSDDKLSPIWKKRAGRCVLLPEESTMCTSSTIID
EEIAPDNNEQETTPLPVNGSTPTAQCDNKHVAAVKNSNSDKKSFGSPLHALVKSMREKQKKRNRRAKANSKSENRARKAL
RTITFILGAYLMCWTPYHVMILIIGLCQTCVYPVQIYHFSYWLCYLNSPINPFCYALANQQFKRTFTRILKLDCHRT

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