Gene
| Gene Model ID | pfu_aug1.0_10187.1_17590 |
|---|---|
| Locus | scaffold10187.1 : 3376 ... 17828 : + |
| To GenomeBrowser | scaffold10187.1:3376..17828 |
| Genes list of scaffold | scaffold10187.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10187.1_17590.t1 | 2 | 1 | HECT | 239 | 485 | 0.0 | 197.6 | 6.5e-28 | 9.6e-24 | 84.0 |
| pfu_aug1.0_10187.1_17590.t1 | 2 | 2 | HECT | 499 | 590 | 0.0 | 197.6 | 1.4e-35 | 2.1e-31 | 109.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_10187.1_17590.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10187.1_17590.t1 atgacgatggcatctctggaggagaccaaaaatgaagacctgccaaccgaccctttggtcgtagttaacagccgagaaac tgtatctaacaacaaccgaatggcagatcttaatcaaccaactgtccaacagtcagttacaggtgccgagggaggagtcg ataatggaaatgtcacagaacctggtgataaggacggtaaaaaaccggagagtcagacacggggatcaccaaccaacccc atgagtgtcagtgtacctaacttaccaaccagtatggaacagaccgttaacttactggaaacatttgctgctgtggccag gagaaatcttggaactgtcagtatgaacaacagatgtaacagtgttaggctcaatccagctaatcttcagagtaacaacc ttctgagtaccgcccagagtttccctaatttgaccacgtccaatgctccaacctctaacaccttaacaaccacccaagca atggctaacgtgaccttgagccaggccttgacccgaagcctgacctcttctagtgaaagcgacgaattcctcgatagctg tagagcttctactttgctggcagaattagatgatgatgaagaaatgccaggacctgatgatgacgacgatgagaatgaag atgagaatgaagatgatgatgtttatgacgatgtattgattgatattggacaaggaatgaagccccctggatattacata cagaggtctgagggtctgttcccagccccattaccccaggatctaacagatattggccgagttgagagactataccactt catgggaaccttccttgcaaaaagtttacaggacaaaagacttgtagatctgccgttttctcgccctttcttaaaattaa tgtgcatgggtgaagttggtcaccatataacacaaaaatacactgagtcccttcataagtccgctggtagctcatctgag tcgtatcacagtgaaataagtgactcggtcctctccacaatgacgtctagtatagaagacaaggagctgatcttagaccc gcccaaatctcgacagccggacacacctgcttggtacgccggtattcttacagaggaggactttgatgttattgaccctt accgtgccagcttcctgaaacagcttagagaacttgtggctaaaaaacagaggatactgaaagatcgtgctttatcacag gaccaaaagaacatactgatacaaagacttggattaaccaatcctcagcgtccagaggaaacttacagacttgatgattt agggttgaccttccaatttaacccttcatccagagtctatggctttacaagctatgacctcaaaccagacggagaaaaca tggatgtgacgttagagaatgtggaggagtatgtagatctagtgacagatttctgtctgaaccttggtattaggaaacaa cttgacgcattcagagtttcagaatttctaacatttaagttttggtatattttcagccctggatttgtacgctttgtgaa tgttgtgtgtaacctgacatcagatgagagaaaagctttcatacaattcgtcacaggatgttcctctttgccaccaggtg gcctttcaaacttacatccacgattatctgtagctcgtaagaacgatgtggaatccagttatccatctgtcaacacgtgt tatcactatctcaaactcccagaatattcaagtgaagaaattctaagagaccgtctgctcactgcaacaagagagaagga attccattttaattga |
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Protein
| Protein ID | pfu_aug1.0_10187.1_17590.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10187.1_17590.t1 MTMASLEETKNEDLPTDPLVVVNSRETVSNNNRMADLNQPTVQQSVTGAEGGVDNGNVTEPGDKDGKKPESQTRGSPTNP MSVSVPNLPTSMEQTVNLLETFAAVARRNLGTVSMNNRCNSVRLNPANLQSNNLLSTAQSFPNLTTSNAPTSNTLTTTQA MANVTLSQALTRSLTSSSESDEFLDSCRASTLLAELDDDEEMPGPDDDDDENEDENEDDDVYDDVLIDIGQGMKPPGYYI QRSEGLFPAPLPQDLTDIGRVERLYHFMGTFLAKSLQDKRLVDLPFSRPFLKLMCMGEVGHHITQKYTESLHKSAGSSSE SYHSEISDSVLSTMTSSIEDKELILDPPKSRQPDTPAWYAGILTEEDFDVIDPYRASFLKQLRELVAKKQRILKDRALSQ DQKNILIQRLGLTNPQRPEETYRLDDLGLTFQFNPSSRVYGFTSYDLKPDGENMDVTLENVEEYVDLVTDFCLNLGIRKQ LDAFRVSEFLTFKFWYIFSPGFVRFVNVVCNLTSDERKAFIQFVTGCSSLPPGGLSNLHPRLSVARKNDVESSYPSVNTC YHYLKLPEYSSEEILRDRLLTATREKEFHFN |
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