Gene
| Gene Model ID | pfu_aug1.0_10195.1_39012 |
|---|---|
| Locus | scaffold10195.1 : 6526 ... 17939 : + |
| To GenomeBrowser | scaffold10195.1:6526..17939 |
| Genes list of scaffold | scaffold10195.1 |
| Synonym | pfu_aug2.0_1713.1_11823 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10195.1_39012.t1 | 1 | 1 | TIR | 404 | 540 | 2.2e-26 | 91.9 | 8.9e-30 | 4.4e-26 | 91.0 |
| pfu_aug1.0_10195.1_39012.t1 | 1 | 1 | TIR_2 | 413 | 507 | 1.1e-11 | 44.7 | 3.8e-15 | 1.9e-11 | 44.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10195.1_39012.t1 | gi|291234956|ref|XP_002737415.1| | PREDICTED: uncharacterized protein LOC100367428 [Saccoglossus kowalevskii] | 2.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 2 |
Transcript
| Transcript ID | pfu_aug1.0_10195.1_39012.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10195.1_39012.t1 atgaaacgaaacggatggatcggaccaaagcctccaaatgcatcatgtctttttaatatgtgcaattcgcctggatactg ccaaaatggaggaacatgctctcttaatgaaacaacttgtatgagtaattgtgattgccctgaatctttttcgggattaa gatgcgaaatttctcacctaaccttgagtcctacggattcctctacatatccaacgactcggtctttggaggacaggaag tgctttgatgattttatctgcggacacggtttctgtgatatgacatccggaacttttaattgtgtatgtgatgatcactg ggaaggtgctaaatgtgacaaattcaaatgtgacttaacttgtccctcgggatcgagatgtgaaggtcgtaatgacgtac ccgtatgtgtgatgacgtcaactactacagtcccccctactgaatcatcatctgcagcatctgacctcagacctattcag gagagaacttgtttgaatacttttgtatgcatacatgggtactgtgacagacattcaactcggggatttcgctgtgtctg tgatactacatggggaggagtgttctgtgataaatctttatgtccgtctgaatgtccagaagactgcatcgccgagagta attctcggtacatatgcaataataaaccacaagaagataactcaactactgcaccttcaactgcgcaagttgtccaaagt gcttgcgatgccaattatactatgagaccgttggaggaacgaaaatgtttgccattgacgtgtaagtttggtcagtgcaa gaaaacgaaagtcaacatcaccgttcaaggccaagtgaatgtaaccaccaacatagtgtgtgtttgcgacgataacgttg atggaatattatgtcagaacaagtgttgtttggaatgtggtgagaacggaagatgtgaactagacgaagattccgaaccg ttttgtaattgcagaaccaataggttttacggagaattctgcaatttaacaaggaccgatccaggtccacagtacttaaa agagacatggtatatgtgggtggtaggagtgtgtgccttcgttctcctggttctgatactgactctagtcgttttaccat acatgctgtggagaaacagagtgaccctcatcatgaagattgtgcattacttccaaccttatgaagataacgacgacaga ctttgggacgcttttgtggcgttccgctcgggtggttctgatgaagaattcgtcatgaggacattgcgtccaaagctgga agacgaactcggatttaatctatgtcttcacttcagagattttacccccggcgaaaccatcgccaacaacatcatagaat gtgtcaacaatagtcggagaacaatactcatagtgtcgccaagatttgtggagagcgagtttattcagttcgaatatcaa atagcccaggaacaaatgctgaaacggaagcagcgaattattcccataattctcgaggatatttctgacgtcacaagttc aacagatccgaatttaaagcaaattctcaagtctgtgacatatattgaatggcctgatcattcaaatgaaagaaaagtaa aaacattctggagtcgggtagaactctctatgccgaagagaaaatcagttgaagaaagcagaaagaatccaaagacctca aatatgagaaatcgagtaatcacgtga |
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Protein
| Protein ID | pfu_aug1.0_10195.1_39012.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10195.1_39012.t1 MKRNGWIGPKPPNASCLFNMCNSPGYCQNGGTCSLNETTCMSNCDCPESFSGLRCEISHLTLSPTDSSTYPTTRSLEDRK CFDDFICGHGFCDMTSGTFNCVCDDHWEGAKCDKFKCDLTCPSGSRCEGRNDVPVCVMTSTTTVPPTESSSAASDLRPIQ ERTCLNTFVCIHGYCDRHSTRGFRCVCDTTWGGVFCDKSLCPSECPEDCIAESNSRYICNNKPQEDNSTTAPSTAQVVQS ACDANYTMRPLEERKCLPLTCKFGQCKKTKVNITVQGQVNVTTNIVCVCDDNVDGILCQNKCCLECGENGRCELDEDSEP FCNCRTNRFYGEFCNLTRTDPGPQYLKETWYMWVVGVCAFVLLVLILTLVVLPYMLWRNRVTLIMKIVHYFQPYEDNDDR LWDAFVAFRSGGSDEEFVMRTLRPKLEDELGFNLCLHFRDFTPGETIANNIIECVNNSRRTILIVSPRFVESEFIQFEYQ IAQEQMLKRKQRIIPIILEDISDVTSSTDPNLKQILKSVTYIEWPDHSNERKVKTFWSRVELSMPKRKSVEESRKNPKTS NMRNRVIT |
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