Gene
| Gene Model ID | pfu_aug1.0_10208.1_46163 |
|---|---|
| Locus | scaffold10208.1 : 1 ... 16836 : - |
| To GenomeBrowser | scaffold10208.1:1..16836 |
| Genes list of scaffold | scaffold10208.1 |
| Synonym | pfu_aug2.0_579.1_30935 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10208.1_46163.t1 | 2 | 1 | Ank_2 | 962 | 1031 | 2.0e-34 | 117.7 | 1.8e-16 | 5.4e-13 | 49.0 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 1 | Ank_5 | 962 | 1009 | 6.7e-23 | 80.2 | 1.9e-08 | 5.7e-05 | 23.2 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 1 | Ank | 968 | 1000 | 4.5e-31 | 105.0 | 4.2e-09 | 1.3e-05 | 24.7 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 1 | Ank_3 | 968 | 993 | 1.1e-20 | 71.5 | 4.3e-06 | 0.013 | 15.6 |
| pfu_aug1.0_10208.1_46163.t1 | 3 | 1 | Ank_4 | 971 | 1022 | 4.2e-21 | 74.8 | 7.8e-11 | 2.3e-07 | 31.1 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 2 | Ank_5 | 995 | 1022 | 6.7e-23 | 80.2 | 5.0e-06 | 0.015 | 15.5 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 2 | Ank | 1004 | 1029 | 4.5e-31 | 105.0 | 4.1e-09 | 1.2e-05 | 24.8 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 2 | Ank_3 | 1004 | 1028 | 1.1e-20 | 71.5 | 7.0e-07 | 0.0021 | 18.1 |
| pfu_aug1.0_10208.1_46163.t1 | 2 | 2 | Ank_2 | 1006 | 1099 | 2.0e-34 | 117.7 | 3.0e-25 | 9.0e-22 | 77.2 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 3 | Ank_5 | 1021 | 1076 | 6.7e-23 | 80.2 | 2.6e-13 | 7.7e-10 | 38.6 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 3 | Ank | 1034 | 1067 | 4.5e-31 | 105.0 | 8.6e-09 | 2.6e-05 | 23.8 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 3 | Ank_3 | 1034 | 1063 | 1.1e-20 | 71.5 | 1.3e-06 | 0.004 | 17.2 |
| pfu_aug1.0_10208.1_46163.t1 | 3 | 2 | Ank_4 | 1035 | 1079 | 4.2e-21 | 74.8 | 9.1e-11 | 2.7e-07 | 30.9 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 4 | Ank_5 | 1059 | 1102 | 6.7e-23 | 80.2 | 5.6e-09 | 1.6e-05 | 24.9 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 4 | Ank | 1069 | 1100 | 4.5e-31 | 105.0 | 6.2e-10 | 1.8e-06 | 27.4 |
| pfu_aug1.0_10208.1_46163.t1 | 4 | 4 | Ank_3 | 1069 | 1096 | 1.1e-20 | 71.5 | 1.8e-06 | 0.0054 | 16.8 |
| pfu_aug1.0_10208.1_46163.t1 | 3 | 3 | Ank_4 | 1084 | 1114 | 4.2e-21 | 74.8 | 0.00053 | 1.6 | 9.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10208.1_46163.t1 | gi|71834420|ref|NP_001025302.1| | histone-lysine N-methyltransferase, H3 lysine-9 specific 5 [Danio rerio] | 3.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_10208.1_46163.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10208.1_46163.t1 cttccttcacacagctgaaggctgtaaaagatatagaaaaagacaattctagtcagaaagaagccgaaatttgtgacaaa acacccatagtaaatggtgtgataaaagatagcgtgtctgaaaaaaattcagtacttaatcagaaaacaattgtatttaa aagtggtgaaactgcaatcacaaatggttttagaaatgaaaatgacttgaaagaaaatgataatgcaaatattgatgatg aaaataatgaagcaattttgcctgaaatagagggaagaagagagaaagagactacatcagaggttaaatctggtttaact agtgaatgtttagatagtattggtaataatgacaaggaaaatactgttgaatcaagggagtgtactcctcttagtgatat aagtgtgaattccagtgtgtcaagaagccgtacgcctgtgaatgcagaaaatagcacaaacgatgtgacaatggtgtcaa aagttgaaagatctacagtcatatcgcggagttctgaagaaagatccaatgactcattagatagtacattatgtagcggt gaaagtactgtatcatctttaagtgtgaaatcctcagggccatttaagaaaggcgtaccaagggcacgtaaatctggtcc gactgtgtccaagagtagccttccttcagcagccaaaccgagcacagaatctcccgttaaaaatgtgactctgaacttgc cagatttcgataatccaattcgaatagattccaaaatgctggataaaataagtaagctgggaaaagttaatcaagaaaga gaaggaaggaaagtaaaaagaacttctctacccttgaaggtagaacctcaatcatcgcctgtgataccggaaggattaga cggacatttctctgattcttcgctattagaaaaagacgcttttggtaaagttaaaaaacggaaaagaaagagggcaaggt taggtacttataaactgccaaatgagcttaaaaagaaatcatcgctgaagaagaaagacagtgacaatgataaaaaagag gattcagaatcaaaaagaacagaaggatcttcagacgctagtgttaaagtgaaaaatggttcgatagtttccccaatcag taaaacttctaacgaaaaaagtcccataggaaagtcagacgcctcttccccgaggtctgcctttgatgtactgaaacatg ccaggattacacctcgtaccaaaaacacgctaggaagcactcggcatagaatgggaagtgggaaaagtaaagcacagagt tctctagatgcattccttaacttggcagatcctaaaactagtccaggaattaagcaggagatgcttgtagaagaaacaga agatgctgacaacggtacaagaagggcggggcttcgtaaaaggaaaaaagaaggtgagtgcaattcagcatcaaggatgc gcaatagaaaattaatatcccctttttccgacatttttgctttggatgatgattctgatgaaagcagtggtgtcaacaag gagacagatagcagcaatgttaaaagaaagagaaagccattagaaacatcccaaatcatttctacaaaagaagaaaagaa cgtagaaccaccaacagcacctgtgtcctgtaccccactcggacacaaatctatagttccaacaaccgtgcagagcgcaa cactaagcactcctacaactcttaacaatatagctcaaaccaaaagcctgccgatgataagtttgttacacggaggtatg agacctggcaccaccattctacaaacacagaatccaatggctaccggcattgttaccggctctcacgctccgttgatctt agttccagttaatagtacttctccggtaaatgccataccattacctacctcattgtctaatagtaaaacatcaccatctg ccgctgctcaacccaaaatcatcttatcagtgcctgacccaaagatttccacgactgtagcagggtcaagcattcagcaa gctccgcgcttcattctcatgacaaatgttggtcaaattccgccaaatgcaaggatgcccagtgccacaccaatcataca acccagaaacattgctcagcccaacatgatcaactctctggcagggatacccagacaacctggatgcccgctattgacaa gtactagtattcaggaacttaaatcgtcagccacaaccgtcagttctagtgctccagtacttagtaaaatattgaacagt agacttaatgcgcccaataatgatagattgttagatgaggaggagaggggggaatcccccaaccctgacagtatgaccta tccagttactccgcccaaaactccggaagatcagcagagtgaagactcaagttctgttgcttcggctccatcaggaccca tcccaccagacaaagatatcataccactgtgttcttgtaaaattaatggtgcttcgtttaaaaagcttggtacaggtgtt acttactgtcaagctctagattctgtagatggaaagggcaagttttaccagtgcaagaagcccatggaaggtgtccctaa tcatcgcctacctgttcactacttccacacccagtgccatgtgttaaggaatgggaggtaccactgtcctcactgtgggg aggagtctgaacagtacgaggtgaccttgaccctagacgaaccccgccctgtaacaaccaataacacagtggtagaagat cttcaaaagaaaactagtacaataagagccaaaatgggaattcatgccggtacatataggtctttcctgaaaccagaaaa agatccgacggaagatgaagtgacagccacttataaaatgtctgctgataaaagtatttctacaggtgaaggtcacaacc ctaacgaggtagtagaggagtttgacaaccagacgcccctccatgctgcctgcttaggaggtcatatggccattgtacac atactggttcagatgggtgcttttatacatgccttggacaaagaattgaaaactccactaatgtacgcagctgaaagcaa tcatatccaaatcttcagatatctcgtcaaatgtaaagcaaatgtgtttcagaaggctgaggacggaatgactgtattac attacacagcaaaggcagggcatatagagataatgaagcttttactggacatggacaacatggatgttaatgtacaggat gatggaggctggacccctatcatatgggcttcagaacataaattagcctccgctgtcaggttccttataaaacatggtgc tgatcctaaccttaaagataagtgctgtatagatgagaatagtcctgtatggcttgccctgaaagtcaacaagcagttaa gagggtttgctgctaataggattggtcgagtagataaattaatagacag |
|
Protein
| Protein ID | pfu_aug1.0_10208.1_46163.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10208.1_46163.t1 SFTQLKAVKDIEKDNSSQKEAEICDKTPIVNGVIKDSVSEKNSVLNQKTIVFKSGETAITNGFRNENDLKENDNANIDDE NNEAILPEIEGRREKETTSEVKSGLTSECLDSIGNNDKENTVESRECTPLSDISVNSSVSRSRTPVNAENSTNDVTMVSK VERSTVISRSSEERSNDSLDSTLCSGESTVSSLSVKSSGPFKKGVPRARKSGPTVSKSSLPSAAKPSTESPVKNVTLNLP DFDNPIRIDSKMLDKISKLGKVNQEREGRKVKRTSLPLKVEPQSSPVIPEGLDGHFSDSSLLEKDAFGKVKKRKRKRARL GTYKLPNELKKKSSLKKKDSDNDKKEDSESKRTEGSSDASVKVKNGSIVSPISKTSNEKSPIGKSDASSPRSAFDVLKHA RITPRTKNTLGSTRHRMGSGKSKAQSSLDAFLNLADPKTSPGIKQEMLVEETEDADNGTRRAGLRKRKKEGECNSASRMR NRKLISPFSDIFALDDDSDESSGVNKETDSSNVKRKRKPLETSQIISTKEEKNVEPPTAPVSCTPLGHKSIVPTTVQSAT LSTPTTLNNIAQTKSLPMISLLHGGMRPGTTILQTQNPMATGIVTGSHAPLILVPVNSTSPVNAIPLPTSLSNSKTSPSA AAQPKIILSVPDPKISTTVAGSSIQQAPRFILMTNVGQIPPNARMPSATPIIQPRNIAQPNMINSLAGIPRQPGCPLLTS TSIQELKSSATTVSSSAPVLSKILNSRLNAPNNDRLLDEEERGESPNPDSMTYPVTPPKTPEDQQSEDSSSVASAPSGPI PPDKDIIPLCSCKINGASFKKLGTGVTYCQALDSVDGKGKFYQCKKPMEGVPNHRLPVHYFHTQCHVLRNGRYHCPHCGE ESEQYEVTLTLDEPRPVTTNNTVVEDLQKKTSTIRAKMGIHAGTYRSFLKPEKDPTEDEVTATYKMSADKSISTGEGHNP NEVVEEFDNQTPLHAACLGGHMAIVHILVQMGAFIHALDKELKTPLMYAAESNHIQIFRYLVKCKANVFQKAEDGMTVLH YTAKAGHIEIMKLLLDMDNMDVNVQDDGGWTPIIWASEHKLASAVRFLIKHGADPNLKDKCCIDENSPVWLALKVNKQLR GFAANRIGRVDKLID |
|