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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10219.1_53503
Locus scaffold10219.1 : 1 ... 11281 : +
To GenomeBrowser scaffold10219.1:1..11281
Genes list of scaffold scaffold10219.1
Synonym pfu_aug2.0_438.1_27400

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10219.1_53503.t1 1 1 NCD3G 79 117 2.0e-08 33.8 2.2e-12 3.3e-08 33.1

Transcript
Transcript IDpfu_aug1.0_10219.1_53503.t1
Definition-
>pfu_aug1.0_10219.1_53503.t1
acgtgacagaatatgagacactcttcaatggaagaaacgctgtctttacgtacggccaagcactgatatcagcacataat
gagttttgtcatgatcttaaggaacggtgtgagggattcgatgaagtacttgctgacggcagtaaattatttgcttacct
taaatatgtaaaaggagagcaaggtctcaacttggatataccatctgcatctgtaaacaatttcgcttatgatttatcaa
cttgttcagcggaatgtcgagtaggtcagtacagacaccaggatgatgtcaacaaatgctgctggaaatgtgaagaatgt
actgataaggatacatatgtcaattcttcaaatccatacatggacgatttgttgtccatcaataatccaaaattcgcgga
ttacctcagcagtatcttcccttcggagcttgaagttatagaaactacagagacaaataattcagcatcctattcctaca
taatgttgtcctacgacactgatggtcacatcaataccccactctataacaaacgtgacgacttcaatttcagcataaat
aagttttctttgctgagtagcaacatcccttcatcgcctgcttatgacgtgttcatatctcagttgatacgctatgccag
agcaagtactaaatatacggattttgttctgaaagctaggcgtctttcagatacgctattaagtcagggatatgtttgtg
accgactaacatcgtcactgagaaagttctgcggtcgatatggggaactcgtcattcactttgatgtctcactctccaga
atggtggatgatattctgtcatag

Protein
Protein IDpfu_aug1.0_10219.1_53503.t1
Definition-
>pfu_aug1.0_10219.1_53503.t1
VTEYETLFNGRNAVFTYGQALISAHNEFCHDLKERCEGFDEVLADGSKLFAYLKYVKGEQGLNLDIPSASVNNFAYDLST
CSAECRVGQYRHQDDVNKCCWKCEECTDKDTYVNSSNPYMDDLLSINNPKFADYLSSIFPSELEVIETTETNNSASYSYI
MLSYDTDGHINTPLYNKRDDFNFSINKFSLLSSNIPSSPAYDVFISQLIRYARASTKYTDFVLKARRLSDTLLSQGYVCD
RLTSSLRKFCGRYGELVIHFDVSLSRMVDDILS

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