Gene
| Gene Model ID | pfu_aug1.0_10229.1_68158 |
|---|---|
| Locus | scaffold10229.1 : 2046 ... 10082 : + |
| To GenomeBrowser | scaffold10229.1:2046..10082 |
| Genes list of scaffold | scaffold10229.1 |
| Synonym | pfu_aug2.0_1478.1_28310 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10229.1_68158.t1 | 3 | 1 | G-patch_2 | 96 | 164 | 3.4e-23 | 81.2 | 6.8e-27 | 3.4e-23 | 81.2 |
| pfu_aug1.0_10229.1_68158.t1 | 1 | 1 | G-patch | 123 | 161 | 7.1e-09 | 35.3 | 3.0e-12 | 1.5e-08 | 34.2 |
| pfu_aug1.0_10229.1_68158.t1 | 3 | 2 | G-patch_2 | 257 | 275 | 3.4e-23 | 81.2 | 0.85 | 4200.0 | -2.4 |
| pfu_aug1.0_10229.1_68158.t1 | 3 | 3 | G-patch_2 | 330 | 355 | 3.4e-23 | 81.2 | 0.74 | 3600.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10229.1_68158.t1 | gi|115751575|ref|XP_795152.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10229.1_68158.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10229.1_68158.t1 atgatgtcgccgatgtcggcgataatcgttacaacactacaagatgatattattcttgctaggacaaaacctgagaagaa ggttcaagagtatgtgatccctctaatacgtcagaacagatggcagcagtcagggaaagatggaggggatgttgaaaatc aagcagttcaggagctccttgatgatgcagccaaacagaatgacgagtggcaggagagaggaacagttaggtctgactta tctattccactgttaatgcagaaccaagtacctgagggttatgaaacagatgataggttggatgtctctcttagacctaa tgagccagaggaagcagattatgatgaagtgcctatagaacagtatggaatggctctgctgaaaggaatgggatggaaag aaggtgatggtattggcaaaaataacaaagctgttgcaccagtagtggctacactaaggccaaagggtatgggacttggt gcagataggtcacagattaaacagttaaatcacacgtctaacaagaaagatgacaatgaagacgagttagtgttgaaaaa agggagtcattgtgtgatagttaaaggaagcaacagggatttgtatggtgtgatagaaggacttgatgaagataattgta gggtgatggtcaagctggcacttagtggtaaaataatatcacagagtcaatacggcattaaactggtcactgcaaaggaa tataagaaatactcaaagtatctcaacaaagggaaagcagatgagtataaagaaaaggaagagaaaaaatctcaagacaa agaaagatataaccacaagaaatcaaaacatcatagagacagatccaaggagagggagagaagtcactcaaaagatagag atgacagagaggaaagagggagtagatcggctggaccgatggacagagattcctcggaaagaatgagaggggaggagaga ctgagaggggagggaaggagagaaaccgacagctcgtcacacagaaagcgtaaatatgacgagagaccagactctaatct ttttacaaaagtacaagacattccatttaagacgtttccatattataaaaatctactcggtttacaccggacggaggaca gaggacggacggacgatggacggcatgctttgacaatagctcaggtgaggtaa |
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Protein
| Protein ID | pfu_aug1.0_10229.1_68158.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10229.1_68158.t1 MMSPMSAIIVTTLQDDIILARTKPEKKVQEYVIPLIRQNRWQQSGKDGGDVENQAVQELLDDAAKQNDEWQERGTVRSDL SIPLLMQNQVPEGYETDDRLDVSLRPNEPEEADYDEVPIEQYGMALLKGMGWKEGDGIGKNNKAVAPVVATLRPKGMGLG ADRSQIKQLNHTSNKKDDNEDELVLKKGSHCVIVKGSNRDLYGVIEGLDEDNCRVMVKLALSGKIISQSQYGIKLVTAKE YKKYSKYLNKGKADEYKEKEEKKSQDKERYNHKKSKHHRDRSKERERSHSKDRDDREERGSRSAGPMDRDSSERMRGEER LRGEGRRETDSSSHRKRKYDERPDSNLFTKVQDIPFKTFPYYKNLLGLHRTEDRGRTDDGRHALTIAQVR |
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