Gene
Gene Model ID | pfu_aug1.0_10251.1_39018 |
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Locus | scaffold10251.1 : 1856 ... 6487 : + |
To GenomeBrowser | scaffold10251.1:1856..6487 |
Genes list of scaffold | scaffold10251.1 |
Synonym | pfu_aug2.0_242.1_07222 |
Manual annotation
Study field | Biomineralization |
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Gene name | Pfty1 |
Description | NCBI Blastp search "BAF42771.1" |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_10251.1_39018.t1 | 1 | 1 | Tyrosinase | 9 | 188 | 4.8e-30 | 105.3 | 7.2e-34 | 1.1e-29 | 104.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 3 |
>Adult tissues | |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_10251.1_39018.t1 |
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Definition | - |
>pfu_aug1.0_10251.1_39018.t1 atgcatagtttcgctgcatatcgttacgctcacctgggtcctagctttcttggatggcatagagtgtacctaattatgta tgaagaagcgttacaggagattcgttcagatgttgtgttgtgctactgggattcaacgttagattttctcatgccaggca gtacccagaggttcaccgtagcattttctgccgatctttttggtaacggccgaggtaatgtaatcaatggcgcttttgcg aactggcagctacctggaggtggaactctacgaagaaatattgctgcagaccgatttccagggcctcctcccagtttgac ccgacctggaattgtcgatcttattgcaacagatccctcaataacttctcatactcagattgtgcgtggtggcacaggtt ttacagaccccgatactggaagagttcacacttgggaacaggagcacgacaacactcatgtatgggtgggcgagataatg caggatgtcgttgcagcaccaggagaccctgtattcttttttcaccataccttcatagattacggatgggaattattcag acaaaaaatcaatccaaatggaaacattgaccttcgcaatgattatccaaatgtcgggggattccatgctccggatgcac ctatgttcggatttcaaggaataacaaatagagatggatattctgatgagtatactagaatgtacgcacctcatccaact tgcagtaacgggtgcggtggatcaacacaattcctttactgtcctgacggtggtcctatggcaaatcctaacagaagatg catttcgagagacataaactcggacttggtgccagcagcggcggtcgctcccgctgctgcaatgcaagctatggcatctg gaccagaagcaactatggcaagatttggaccagcagctacaatgggaatgttcggcccagcagcaacacgggcaggattt agcccagcagcaacaatgagtatgtttggacctgcagcatcaagagcactatttggaccagcagccatgacacgggcagt tcctgccgttggttctgcaagagtttctgtggaggctaccgatgctgttgcagttagatcagcattgagcgaaccgcctc ctccggtttctgggatatcatttgaatcatccttttctgattcaaggctttaa |
Protein
Protein ID | pfu_aug1.0_10251.1_39018.t1 |
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Definition | - |
>pfu_aug1.0_10251.1_39018.t1 MHSFAAYRYAHLGPSFLGWHRVYLIMYEEALQEIRSDVVLCYWDSTLDFLMPGSTQRFTVAFSADLFGNGRGNVINGAFA NWQLPGGGTLRRNIAADRFPGPPPSLTRPGIVDLIATDPSITSHTQIVRGGTGFTDPDTGRVHTWEQEHDNTHVWVGEIM QDVVAAPGDPVFFFHHTFIDYGWELFRQKINPNGNIDLRNDYPNVGGFHAPDAPMFGFQGITNRDGYSDEYTRMYAPHPT CSNGCGGSTQFLYCPDGGPMANPNRRCISRDINSDLVPAAAVAPAAAMQAMASGPEATMARFGPAATMGMFGPAATRAGF SPAATMSMFGPAASRALFGPAAMTRAVPAVGSARVSVEATDAVAVRSALSEPPPPVSGISFESSFSDSRL |