Gene
| Gene Model ID | pfu_aug1.0_10257.1_31901 |
|---|---|
| Locus | scaffold10257.1 : 5496 ... 24681 : + |
| To GenomeBrowser | scaffold10257.1:5496..24681 |
| Genes list of scaffold | scaffold10257.1 |
| Synonym | pfu_aug2.0_19363.1_13255 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10257.1_31901.t2 | 1 | 1 | Pacs-1 | 10 | 137 | 7.7e-23 | 80.7 | 5.9e-27 | 8.8e-23 | 80.5 |
Transcript
| Transcript ID | pfu_aug1.0_10257.1_31901.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10257.1_31901.t1 atgcagttatacagtaatgacaaagagagcacacaccttcttgccatggttatgatgctgtcactttccagtcagccagt cgaccagctcgttaacggtcaaaggaaaataacgtcagatgctgacagatcacctgacatagataacgagtcttacgacg aagacgatcaagaggactcatctaacgatgacatgatgagcgatagcgagcctgccatgttagacggtgaggggattccc catccacgtaaacaaagccgtagtaaaataagaggtcctgtctcagcaaggggaagggctttagactctgaggcagacca tgagctgggacactttgatacggtccctgaccccggtgatgacgactttgaattagacgatatagaagatctcagcgaca gcggacctgagatggatacagtcagtgttgtctctacaccaaaaccgagactaaaaccattctttcaagccatgtcagtg aatgtggaatcacaggacagcagtaaagagttggatcctgagtccgccactccatctccacaaataaaagtacgtgcttc actgaccgcacctcaggacaaggataaaattagtcgaggccgtagtcgatcatatcgagagaagaagaacttaaaagacg agaaaacaaaaattctccgtcggcacagtgctgggcctgtgcatggatcgcaattgatgcagtcaatttatcagttttac cttggtcttacacattcagattctcaagaaatcgtgaatcgagtttcgaagtatttaagtggtgccacaggtgtaatgca ggtccctatagcagaagccatggtcatgtgtaaaagcaaaggaggtgaagaagaatctacgcagatatttattccattcc ttagtgaggtgaaaataggaaatccagatcttatgaatgcttcaattgacatggaggacggtaacatgaccagtagtcag atggtgaattctccatctttatctagctctccgccctcgtcattcctagataaaccaaagacagatgtatcaactccccc aagctcacctaatgtcagtctcaactccgctaattctagtcaaggacctctgtccaacatcactccaacactacctgggg agtttatggaattacaggtagactactggacaatggccagcaaacctgacagtaccgaaaagtctgacaaagccagtaaa aaggatagcaacaaaattacgctgaaaactaccttcaaatccctgcatgtacaacgattggctcaatcgggtatgagttc agaattccctactactgtgttctccatggttgtagtaacaaaggagaagaaacagaaaagtgagtataaccataatgttg gttaa |
|
| Transcript ID | pfu_aug1.0_10257.1_31901.t2 |
| Definition | - |
>pfu_aug1.0_10257.1_31901.t2 atggaggacggtaacatgaccagtagtcagatggtgaattctccatctttatctagctctccgccctcgtcattcctaga taaaccaaagacagatgtatcaactcccccaagctcacctaatgtcagtctcaactccgctaattctagtcaaggacctc tgtccaacatcactccaacactacctggggagtttatggaattacaggtagactactggacaatggccagcaaacctgac agtaccgaaaagtctgacaaagccagtaaaaaggatagcaacaaaattacgctgaaaactaccttcaaatccctgcatgt acaacgattggctcaatcgggtatgagttcagaattccctactactgtgttctccatggttgtagtaacaaaggagaaga aacagaaaagtgagtataaccataatgttggttaa |
|
Protein
| Protein ID | pfu_aug1.0_10257.1_31901.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10257.1_31901.t1 MQLYSNDKESTHLLAMVMMLSLSSQPVDQLVNGQRKITSDADRSPDIDNESYDEDDQEDSSNDDMMSDSEPAMLDGEGIP HPRKQSRSKIRGPVSARGRALDSEADHELGHFDTVPDPGDDDFELDDIEDLSDSGPEMDTVSVVSTPKPRLKPFFQAMSV NVESQDSSKELDPESATPSPQIKVRASLTAPQDKDKISRGRSRSYREKKNLKDEKTKILRRHSAGPVHGSQLMQSIYQFY LGLTHSDSQEIVNRVSKYLSGATGVMQVPIAEAMVMCKSKGGEEESTQIFIPFLSEVKIGNPDLMNASIDMEDGNMTSSQ MVNSPSLSSSPPSSFLDKPKTDVSTPPSSPNVSLNSANSSQGPLSNITPTLPGEFMELQVDYWTMASKPDSTEKSDKASK KDSNKITLKTTFKSLHVQRLAQSGMSSEFPTTVFSMVVVTKEKKQKSEYNHNVG |
|
| Protein ID | pfu_aug1.0_10257.1_31901.t2 |
| Definition | - |
>pfu_aug1.0_10257.1_31901.t2 MEDGNMTSSQMVNSPSLSSSPPSSFLDKPKTDVSTPPSSPNVSLNSANSSQGPLSNITPTLPGEFMELQVDYWTMASKPD STEKSDKASKKDSNKITLKTTFKSLHVQRLAQSGMSSEFPTTVFSMVVVTKEKKQKSEYNHNVG |
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