Gene
| Gene Model ID | pfu_aug1.0_10270.1_60753 |
|---|---|
| Locus | scaffold10270.1 : 6935 ... 21722 : - |
| To GenomeBrowser | scaffold10270.1:6935..21722 |
| Genes list of scaffold | scaffold10270.1 |
| Synonym | pfu_aug2.0_281.1_03921 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10270.1_60753.t1 | 4 | 1 | OATP | 48 | 276 | 0.0 | 205.7 | 1.3e-35 | 4.8e-32 | 110.7 |
| pfu_aug1.0_10270.1_60753.t1 | 3 | 1 | MFS_1 | 56 | 132 | 9.6e-06 | 24.5 | 0.00034 | 1.3 | 7.6 |
| pfu_aug1.0_10270.1_60753.t1 | 3 | 2 | MFS_1 | 214 | 516 | 9.6e-06 | 24.5 | 1.8e-06 | 0.0069 | 15.1 |
| pfu_aug1.0_10270.1_60753.t1 | 4 | 2 | OATP | 277 | 335 | 0.0 | 205.7 | 3.6e-08 | 0.00013 | 20.1 |
| pfu_aug1.0_10270.1_60753.t1 | 4 | 3 | OATP | 339 | 360 | 0.0 | 205.7 | 0.04 | 150.0 | 0.1 |
| pfu_aug1.0_10270.1_60753.t1 | 4 | 4 | OATP | 428 | 632 | 0.0 | 205.7 | 8.7e-27 | 3.2e-23 | 81.5 |
| pfu_aug1.0_10270.1_60753.t1 | 3 | 3 | MFS_1 | 593 | 635 | 9.6e-06 | 24.5 | 0.021 | 79.0 | 1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10270.1_60753.t1 | gi|109107945|ref|XP_001084977.1| | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_10270.1_60753.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10270.1_60753.t1 atgggaacgaatgtggaaagtaatggcgttcaatacaaaaagaaacaggaatttgacaagcttgacggcgacgatgaccc agacacagaatgtggagtcggaagcttccgcccgagttttctccaatgtttcgcgaatgttaatgcctttgtgggtacct acagcttcatcggaatgatctcacagactctgtctgtttatgttaattctcaggtacccgccttggagaaacaattcggt ttgaacagtgcagaaagtggtctggtgatgagcttcaatgatatagggttcttcaccacaattttgtttgctgcgtccat tgtccgttttgtacatatccctcgttttatttatctttgtatgatcctatatgggttttcgggaatcatttgcagtatcc ctcatttcattgcccaaggacaaggtttacttgataacttttacatagaaagcagtatagtggttgattccaataatact atgcccaaagaatcaaagccagacttactttgtgatgctacaagaattctcaagaacatctctgacgtgggaaattgtgc cgctgactcagaatcgaaacttgcacagctgatatcccccagcatttccatcaagaaaacagcgttaggtctaataggta taggcatggtcctccaaggtataggaaaggcgccacgtggtgcagctttcactgtgtatgtagatgataatgtagataga agaaagactggattctatgcaggtattgcaacaatgttctcaatctttggtccggctctttcatatggactaggaggggt attcagccgaatgtacgtgacattggaagcgggaacaaatctgtcatcggtagcactgggagccttttttggcggcttga taactagaaggatcccaatgactccaagaaatggcttcaaggtcatattaatcctcttcgtcattcacaatgctcttttt gctgctttattcttcctcggctgtgaccagcaagaaattcaaggaccaacaggatgcgtgaaagatactgataaagccac ggctctaggcctaagctccttcttgacatcttcccttggtatagagttggagcacttccgttttattcatatgaccgctg ttactaatggatgtgtccgggtcattattatgggtctgagagaggaagagaatgcatttcagcagaaaaagtacatagaa gatgactctgaaaatgccgatgaaacatcatgtggcattggaagatttcaaccaaatttccttcaagcttttgcgaatat taacgcttttgtcggcgcctacagctttatcgggcttatttcacagactttgtcggtatacgtcaactctcaagttcccg ccttggaaaaacagtttggtttgaatagcgctgaaagtggtcttgtcatgagttttaatgacattgggttctttactaca gttcttttcgctgcttccgtcatgcgttttgtacatattcctcgtttcatttatttttgtatgatactgtatggcttatc tggggtcctttgtagcatcccccatttcattgcacaaggaaagggcttgctggataacttttacattgaaagttcaacaa cagtgacaagcaacaatacaatgtccaaagaaaccaaatcagaattactgtgtgacagtactagaattctacagaattta actgaccaaataagctgtgctgccgactctgaatccaaatttgcacaccttattactccaagtatttccataaagaaaac agctttaggccttataggcatagggatggttctacagggtattggcaagtcaccaagaactacggcattcttgttatatg tagatgataatgccgatagaagaaaaacagggttctacggagcgttatcgtacggccttggaggtgtttttagtcgaatg tacgttacattagaaggaaaaacgaaaagcaaacaaactgaaaaggaggacttcggcaggactaccatgcactaccatca gcggaatcctgatacacagacaattcttaaaatgctcatgtttttgtataaacaaaaagccctttcttttcaaggttaca tcacaaacatggcgtttagtcatagaaccccgcagttgaaatgttttgcaagttga |
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Protein
| Protein ID | pfu_aug1.0_10270.1_60753.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10270.1_60753.t1 MGTNVESNGVQYKKKQEFDKLDGDDDPDTECGVGSFRPSFLQCFANVNAFVGTYSFIGMISQTLSVYVNSQVPALEKQFG LNSAESGLVMSFNDIGFFTTILFAASIVRFVHIPRFIYLCMILYGFSGIICSIPHFIAQGQGLLDNFYIESSIVVDSNNT MPKESKPDLLCDATRILKNISDVGNCAADSESKLAQLISPSISIKKTALGLIGIGMVLQGIGKAPRGAAFTVYVDDNVDR RKTGFYAGIATMFSIFGPALSYGLGGVFSRMYVTLEAGTNLSSVALGAFFGGLITRRIPMTPRNGFKVILILFVIHNALF AALFFLGCDQQEIQGPTGCVKDTDKATALGLSSFLTSSLGIELEHFRFIHMTAVTNGCVRVIIMGLREEENAFQQKKYIE DDSENADETSCGIGRFQPNFLQAFANINAFVGAYSFIGLISQTLSVYVNSQVPALEKQFGLNSAESGLVMSFNDIGFFTT VLFAASVMRFVHIPRFIYFCMILYGLSGVLCSIPHFIAQGKGLLDNFYIESSTTVTSNNTMSKETKSELLCDSTRILQNL TDQISCAADSESKFAHLITPSISIKKTALGLIGIGMVLQGIGKSPRTTAFLLYVDDNADRRKTGFYGALSYGLGGVFSRM YVTLEGKTKSKQTEKEDFGRTTMHYHQRNPDTQTILKMLMFLYKQKALSFQGYITNMAFSHRTPQLKCFAS |
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