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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10277.1_53511
Locus scaffold10277.1 : 5636 ... 16126 : +
To GenomeBrowser scaffold10277.1:5636..16126
Genes list of scaffold scaffold10277.1
Synonym pfu_aug2.0_1053.1_11401

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10277.1_53511.t1 1 1 ORMDL 11 117 2.0e-36 124.5 4.6e-40 2.3e-36 124.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10277.1_53511.t1 gi|225708402|gb|ACO10047.1| ORM1-like protein 2 [Osmerus mordax] 3.0e-32

Transcript
Transcript IDpfu_aug1.0_10277.1_53511.t1
Definition-
>pfu_aug1.0_10277.1_53511.t1
atgaatatcggcaccgccaccagcgatgacaatccgacacattcgtacctcggaagtcgtggaatatggattacctatgt
actgatcgtgctgatagcacacttcatgctgctcagtgttccctttcttaccgtagccatggcatggtcactcaccaatg
tcatccattgtgttataacatacttcatgctgcacgttacaaaaggtaccccatggggaaccccagaacagggcaaggcc
cgcatgctaacccagtgggaacaaatcgactgtggccaacagttcacacctaccaaaaaattccttacaatcgtacccat
tgttatacaaacaagcttcaaacttcggtcaaactttagaaaatttaatgaattttga

Protein
Protein IDpfu_aug1.0_10277.1_53511.t1
Definition-
>pfu_aug1.0_10277.1_53511.t1
MNIGTATSDDNPTHSYLGSRGIWITYVLIVLIAHFMLLSVPFLTVAMAWSLTNVIHCVITYFMLHVTKGTPWGTPEQGKA
RMLTQWEQIDCGQQFTPTKKFLTIVPIVIQTSFKLRSNFRKFNEF

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