Gene
| Gene Model ID | pfu_aug1.0_10304.1_10115 |
|---|---|
| Locus | scaffold10304.1 : 12896 ... 19578 : + |
| To GenomeBrowser | scaffold10304.1:12896..19578 |
| Genes list of scaffold | scaffold10304.1 |
| Synonym | pfu_aug2.0_68.1_26793 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10304.1_10115.t1 | 1 | 1 | Ion_trans | 102 | 270 | 2.5e-10 | 39.9 | 1.6e-13 | 3.9e-10 | 39.3 |
| pfu_aug1.0_10304.1_10115.t1 | 1 | 1 | cNMP_binding | 372 | 463 | 1.6e-17 | 63.0 | 1.6e-20 | 3.8e-17 | 61.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10304.1_10115.t1 | gi|291224842|ref|XP_002732414.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10304.1_10115.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10304.1_10115.t1 atgactgtaatgaaaaactctcttactaatgaactgtgtgatgcgtatggtgaaatggtgatagcacaatttaccttttt tgcaaagatgggatacaattccaacgctgcagaaaaatcccctgccagcaaaaaattaacaagaattgtaaacgcacaac aacaagctaagaagtgccgtctgtttcgtaaacggtctacatacaaaatatttgtctatgagacaaaacttttcatcaag tgtagcaaaagtgaacacaagtcaccctttgcaaataaaaagaagaattttttcttcggagtcacnttacttgtaagaga caccaaaagactggctaaagtctacctcacctcttggaagttcattgcagacatcattgctataattccattagattttt tatatcttgcggttggtttcgaagcattgctgagactcaacaaatgcttaaaagtatggcgtgtaggagaattcttccag ctcgcagaaactcatacaaattttcctaatttactacgcgtcatcaaccttatcctgatcatcattgtcattatacactg gaatggttgtatatatttctccatcagcagagctctaggttttggttcagatggctgggcataccccgatacaacccaag atacgttttcagactttctgatgatgtatgtgtacagttactactggtcgtgtttgacgttaacaacaattggtgatact ccttatccagaacatgcattagaattcacatattgtattgtttgcagtttaatgggagtgcttatatttgctacaatttt tggaaatgtcggatctcttattaacgagatggacgctgcaagaaacgagtttcaacataaggtggacgctgtaaaacgct acatggaaataagacaagtcagcagttcattgcaggaacgagttgtgaagtggtttgactacacatggaacaacaaacag tcagtcgatgacaaagcagctcttgaatttctgcctgaaaaattaaaagcagagattgctatacatgtgcatcttcagac tctacgaagagtagaattattcaaagattgtgaacctggtctgttgactgagctagtattgaagcttaaattacaagttt tcagtccaggggattacatctgtcgaaaaggggatattggaaaagaaatgtacattataaagcgcggaaagctacaggtt gtgtcagaagacggcaagaaaatatttgtgactctgggagctggtgccgtatttggcgagatcagtatcctgaatatccc aggaaacaaaaccggaaacagacgaacagcaagtgttcggagcgttggatattccgatttgttttgtctcagtaaattag accttcttgatgccctcacagaatatccggatgccagaaaaatgctcaacgaaataggaaagcagaaattagtgaaggat ggtctcatagacgaggaagctgccagaagagaagaaaggaagcaacagaacctagacaagaagatagaacttattgctga tgcggtagatgaccttcacaatgaggtcaaacgtttgatcgaaaagataagcaagaaaaaagaggagaaagagagtagta tgaaaaagaaatcagctgataaggttgatgtaagtacagaggaaccaaagaaagaggacgtgaaaaaagaacaaccaaag gacgagaaagacgatactaaacaggccaaatcgactgtaacggtaaaggaagtcgtcccgaagaaagaagagggaattgt tgataaagatggaaaacaaaaagagggagaaaaacaagatacaataagcaaagaggaaaagaaggaggaaaagtag |
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Protein
| Protein ID | pfu_aug1.0_10304.1_10115.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10304.1_10115.t1 MTVMKNSLTNELCDAYGEMVIAQFTFFAKMGYNSNAAEKSPASKKLTRIVNAQQQAKKCRLFRKRSTYKIFVYETKLFIK CSKSEHKSPFANKKKNFFFGVXLLVRDTKRLAKVYLTSWKFIADIIAIIPLDFLYLAVGFEALLRLNKCLKVWRVGEFFQ LAETHTNFPNLLRVINLILIIIVIIHWNGCIYFSISRALGFGSDGWAYPDTTQDTFSDFLMMYVYSYYWSCLTLTTIGDT PYPEHALEFTYCIVCSLMGVLIFATIFGNVGSLINEMDAARNEFQHKVDAVKRYMEIRQVSSSLQERVVKWFDYTWNNKQ SVDDKAALEFLPEKLKAEIAIHVHLQTLRRVELFKDCEPGLLTELVLKLKLQVFSPGDYICRKGDIGKEMYIIKRGKLQV VSEDGKKIFVTLGAGAVFGEISILNIPGNKTGNRRTASVRSVGYSDLFCLSKLDLLDALTEYPDARKMLNEIGKQKLVKD GLIDEEAARREERKQQNLDKKIELIADAVDDLHNEVKRLIEKISKKKEEKESSMKKKSADKVDVSTEEPKKEDVKKEQPK DEKDDTKQAKSTVTVKEVVPKKEEGIVDKDGKQKEGEKQDTISKEEKKEEK |
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