Gene
| Gene Model ID | pfu_aug1.0_10304.1_10116 |
|---|---|
| Locus | scaffold10304.1 : 19901 ... 22145 : - |
| To GenomeBrowser | scaffold10304.1:19901..22145 |
| Genes list of scaffold | scaffold10304.1 |
| Synonym | pfu_aug2.0_68.1_26794 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10304.1_10116.t1 | 1 | 1 | zf-MYND | 2 | 29 | 2.0e-11 | 43.5 | 4.8e-15 | 3.6e-11 | 42.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10304.1_10116.t1 | gi|291224840|ref|XP_002732413.1| | PREDICTED: uncharacterized protein LOC100366649 [Saccoglossus kowalevskii] | 1.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10304.1_10116.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10304.1_10116.t1 atgaaacgatgtacaaggtgtaaaaaggttttctattgttccaggcagtgtcaaatcaaagactggccagatcacaaagt agattgtggaaagaaattcccagaaacaacaccatacacaagatctttgataaatgataaatttacaactgatgatggat ccatatttggcacagataattcccaaacaaaaacaaatgaggaacccattgttggaagggaaagttcctcagaaacaccg acatcaggcattattgatttcaagagagctgccctttctttgaagacaaataataaagacacatgtgaaagttcagggac aacatctaaaaaataccttcaacatggaaaatttcaaaatgatgttccagtgattgatgtctcaaagccacatgtggaaa tagtggtgaaagcaaataaagagaaacataagattctaattcaaaatgactggactggacaagaaattcttaaaaatctg agtttcaatttgaaaattccattggacaagatcaagattattcataaaggaaagttcatgacccaagaaaccatcaaatc tcatgtctccaacaaagctgtttttcaagtgattggtgaacaggcagccaatgaagatggtcttgatgttagggacatcg aactgatgatgaagcaactcggtgtcggaaggaatgacgctgtgatagcactgagaaagcatggtgatataatagatgcc atgttacagttaggcagcaaataa |
|
Protein
| Protein ID | pfu_aug1.0_10304.1_10116.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10304.1_10116.t1 MKRCTRCKKVFYCSRQCQIKDWPDHKVDCGKKFPETTPYTRSLINDKFTTDDGSIFGTDNSQTKTNEEPIVGRESSSETP TSGIIDFKRAALSLKTNNKDTCESSGTTSKKYLQHGKFQNDVPVIDVSKPHVEIVVKANKEKHKILIQNDWTGQEILKNL SFNLKIPLDKIKIIHKGKFMTQETIKSHVSNKAVFQVIGEQAANEDGLDVRDIELMMKQLGVGRNDAVIALRKHGDIIDA MLQLGSK |
|