Gene
| Gene Model ID | pfu_aug1.0_1031.1_65750 |
|---|---|
| Locus | scaffold1031.1 : 12416 ... 25444 : + |
| To GenomeBrowser | scaffold1031.1:12416..25444 |
| Genes list of scaffold | scaffold1031.1 |
| Synonym | pfu_aug2.0_673.1_11066 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1031.1_65750.t1 | 3 | 1 | zf-H2C2_2 | 17 | 31 | 2.9e-16 | 58.8 | 3.2e-05 | 0.015 | 15.5 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 1 | zf-C2H2_6 | 21 | 45 | 2.1e-07 | 30.5 | 2.6e-06 | 0.0012 | 18.6 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 1 | zf-C2H2 | 22 | 44 | 6.8e-11 | 41.8 | 1.6e-06 | 0.00074 | 19.7 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 1 | zf-C2H2_jaz | 22 | 41 | 3.6e-06 | 26.9 | 9.2e-06 | 0.0044 | 17.1 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 2 | zf-H2C2_2 | 37 | 59 | 2.9e-16 | 58.8 | 1.6e-07 | 7.6e-05 | 22.8 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 2 | zf-C2H2 | 50 | 72 | 6.8e-11 | 41.8 | 6.8e-09 | 3.3e-06 | 27.1 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 2 | zf-C2H2_6 | 50 | 62 | 2.1e-07 | 30.5 | 0.0011 | 0.53 | 10.2 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 2 | zf-C2H2_jaz | 50 | 70 | 3.6e-06 | 26.9 | 0.0016 | 0.77 | 9.9 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 3 | zf-H2C2_2 | 64 | 84 | 2.9e-16 | 58.8 | 1.6e-09 | 7.7e-07 | 29.1 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 3 | zf-C2H2_6 | 77 | 85 | 2.1e-07 | 30.5 | 0.075 | 36.0 | 4.4 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 3 | zf-C2H2 | 78 | 85 | 6.8e-11 | 41.8 | 0.17 | 82.0 | 3.8 |
| pfu_aug1.0_1031.1_65750.t1 | 3 | 3 | zf-C2H2_jaz | 78 | 85 | 3.6e-06 | 26.9 | 0.39 | 190.0 | 2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1031.1_65750.t1 | gi|297486020|ref|XP_002695358.1| | 1.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_1031.1_65750.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1031.1_65750.t1 atggatgaagatgggcccgaaaaaaattgcataagattacctgcaacaagtggaccccgaccttataaatgtgatgtgtg tcaaaggtcatttcgagaggtcgcgaccttgaggaaacatgaacagcttcacagagcagaccgtccgtatgtgtgtaaca cgtgcggtaaatcgtttttgtggtcatccaacttgaaggtgcatgaaagagttcacactggggagcgaccttataaatgt aaaatatgtcacaggtag |
|
Protein
| Protein ID | pfu_aug1.0_1031.1_65750.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1031.1_65750.t1 MDEDGPEKNCIRLPATSGPRPYKCDVCQRSFREVATLRKHEQLHRADRPYVCNTCGKSFLWSSNLKVHERVHTGERPYKC KICHR |
|