Gene
| Gene Model ID | pfu_aug1.0_10319.1_46184 |
|---|---|
| Locus | scaffold10319.1 : 1584 ... 26305 : - |
| To GenomeBrowser | scaffold10319.1:1584..26305 |
| Genes list of scaffold | scaffold10319.1 |
| Synonym | pfu_aug2.0_242.1_07211 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10319.1_46184.t1 | 3 | 1 | Ig_3 | 21 | 93 | 6.9e-18 | 64.9 | 5.0e-05 | 0.083 | 13.4 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 1 | Ig_2 | 22 | 106 | 7.5e-24 | 83.6 | 1.4e-06 | 0.0023 | 18.0 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 1 | I-set | 25 | 107 | 1.4e-32 | 111.4 | 7.9e-08 | 0.00013 | 21.7 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 1 | ig | 25 | 91 | 3.6e-15 | 55.8 | 1.2e-06 | 0.002 | 18.2 |
| pfu_aug1.0_10319.1_46184.t1 | 2 | 1 | V-set | 64 | 94 | 3.0e-10 | 39.9 | 5.9e-05 | 0.097 | 12.5 |
| pfu_aug1.0_10319.1_46184.t1 | 3 | 2 | Ig_3 | 111 | 187 | 6.9e-18 | 64.9 | 5.7e-12 | 9.4e-09 | 35.6 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 2 | I-set | 112 | 200 | 1.4e-32 | 111.4 | 7.0e-21 | 1.2e-17 | 63.5 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 2 | Ig_2 | 112 | 195 | 7.5e-24 | 83.6 | 2.8e-13 | 4.7e-10 | 39.4 |
| pfu_aug1.0_10319.1_46184.t1 | 2 | 1 | C2-set_2 | 113 | 173 | 6.1e-06 | 26.0 | 3.4e-06 | 0.0056 | 16.5 |
| pfu_aug1.0_10319.1_46184.t1 | 2 | 2 | V-set | 120 | 191 | 3.0e-10 | 39.9 | 2.3e-08 | 3.7e-05 | 23.5 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 2 | ig | 126 | 185 | 3.6e-15 | 55.8 | 3.9e-09 | 6.4e-06 | 26.2 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 3 | I-set | 210 | 283 | 1.4e-32 | 111.4 | 8.9e-06 | 0.015 | 15.1 |
| pfu_aug1.0_10319.1_46184.t1 | 3 | 3 | Ig_3 | 210 | 272 | 6.9e-18 | 64.9 | 0.00033 | 0.55 | 10.7 |
| pfu_aug1.0_10319.1_46184.t1 | 2 | 2 | C2-set_2 | 213 | 260 | 6.1e-06 | 26.0 | 0.021 | 35.0 | 4.3 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 3 | Ig_2 | 215 | 283 | 7.5e-24 | 83.6 | 6.7e-07 | 0.0011 | 19.0 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 3 | ig | 217 | 241 | 3.6e-15 | 55.8 | 0.088 | 140.0 | 2.6 |
| pfu_aug1.0_10319.1_46184.t1 | 1 | 1 | fn3 | 288 | 375 | 6.9e-06 | 26.1 | 1.0e-08 | 1.7e-05 | 24.8 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 4 | ig | 320 | 335 | 3.6e-15 | 55.8 | 0.098 | 160.0 | 2.4 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 4 | Ig_2 | 322 | 368 | 7.5e-24 | 83.6 | 0.24 | 390.0 | 1.2 |
| pfu_aug1.0_10319.1_46184.t1 | 4 | 4 | I-set | 324 | 375 | 1.4e-32 | 111.4 | 0.05 | 83.0 | 3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10319.1_46184.t1 | gi|301758856|ref|XP_002915289.1| | 3.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_10319.1_46184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10319.1_46184.t1 atggaagattctcaaaacctaaagatactgaagaacaatgtcgaagtgcaggatgaacccatattagtgggaggtaaccc cgtagactttgtttgtcaggccgagggtttggcggccggggaaaatccgggactcaattggtacaacaaagatggatcac tcctcttgcctaactgggaaaggatacaagtgtacaatcagcgtggagacttttccaaactgactatgaatatagacggt gttatagaggaagacgcagggacgtacaagtgtaacggaacactaaatggccagccaagatctgtcgatctgacagtccg tgttagcattccgccaaagataacggtaggacccaatacacagaaggtggtggtgggcaccgaggctcgcatggagtgta gggcatccggcaaacctcagccgtccttcaaatggtacaaggaccagaattccaatcccctgaaaggtgaccggtatacc atcgatggagacaacggattcttcacgataaactctgtgatcagtgacgacagaggactttacagatgtgttgcagataa tggatatggtactgatgaacaacaagctgatctcgatgttattattccgcctgagattcgtgatttccggaacattagtg gtacggagggtaacgaagcaacaatggtctgcagagcgtacggagatccgatacccaccattaagttcaagaaagacggg aacacacaatcattcattgatggtactcaaccaatcgccatagatttttccaacgagcaacaaaaaattggtgaatatgt gtgtatagccagcaatgatgtaggcaccagttattcttctttcaacctcttaaaagctcaggcaccaagtcagcccactg catcagaagtagatacattccccacggaaacaaagctgtccatcaacctcgcttataatcccaccctcggacctgcgcca aataaagtcggtgtcttctggtctaaaaataatcaaccaatgggatccaaagtaattaacgtagctcccaaccaagttaa ggtaacagccatagttgaacaactagagccgtccacagcctatacgttcagtgtgatcgcctacagtcccgcaggaaata gtacaccatacacccagcaaatcaatacgctggccaaacagttacttccccttattagacggtttcttgcatatagtaat tgcggcgtcatcaaactcaaggaaaccagcgttaaaatccggaaaaatgtccatcgaattcgatgtttctgtaggaattt cattttcatcacaatgaatttacgtcaagtagagattcaggatgatttaagcaatgaaggggaataccagtttaagaaag aattatcggcattttatcccgcaataactgtacagccttctacaagtaattgcggcgtcatcaaactcaaggaaaccagc gttaaattccagaaaaatgtccatcgaattcgatgtctctgtaggaatttcattttcatcacaatgaatttacgtcaagt agagattcaggatgatttaagcaatgaaggggaataccagtttaagaaagaattatcggcattttatcccgcaataactg tacagccttctacaagcgacaacctgtctaacgtgacaatgaccgagatttttctgtcccgtaccgaattccgaatctgt atattacgacttttagtgttgcaaaggacccaaacaatataa |
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Protein
| Protein ID | pfu_aug1.0_10319.1_46184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10319.1_46184.t1 MEDSQNLKILKNNVEVQDEPILVGGNPVDFVCQAEGLAAGENPGLNWYNKDGSLLLPNWERIQVYNQRGDFSKLTMNIDG VIEEDAGTYKCNGTLNGQPRSVDLTVRVSIPPKITVGPNTQKVVVGTEARMECRASGKPQPSFKWYKDQNSNPLKGDRYT IDGDNGFFTINSVISDDRGLYRCVADNGYGTDEQQADLDVIIPPEIRDFRNISGTEGNEATMVCRAYGDPIPTIKFKKDG NTQSFIDGTQPIAIDFSNEQQKIGEYVCIASNDVGTSYSSFNLLKAQAPSQPTASEVDTFPTETKLSINLAYNPTLGPAP NKVGVFWSKNNQPMGSKVINVAPNQVKVTAIVEQLEPSTAYTFSVIAYSPAGNSTPYTQQINTLAKQLLPLIRRFLAYSN CGVIKLKETSVKIRKNVHRIRCFCRNFIFITMNLRQVEIQDDLSNEGEYQFKKELSAFYPAITVQPSTSNCGVIKLKETS VKFQKNVHRIRCLCRNFIFITMNLRQVEIQDDLSNEGEYQFKKELSAFYPAITVQPSTSDNLSNVTMTEIFLSRTEFRIC ILRLLVLQRTQTI |
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